Gene Daro_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2004 
Symbol 
ID3567720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2159538 
End bp2160020 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content51% 
IMG OID637680476 
Productlow molecular weight phosphotyrosine protein phosphatase 
Protein accessionYP_285220 
Protein GI71907633 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value0.704301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATC GCGTGCTACT CGTCTGCATG GGCAATATCT GTCGCTCCCC AACGGCGGAG 
GGCGTTCTTC GTTATTTTAT TACAATCAAT AACCTCGGCG ATAAAGTTGA AGTTGATTCT
GCGGGGACGC ACGGCTACCA CGTTGGTGAA GCGCCGGACT CCAGAACTCA GCGGGCAGCT
TCGGTTCGGG GTTATAACCT GTCACAACTG AGGGCGCGAA AGGTTGCCCG CCAGGATCTG
GATTATTTCG ATCTGATCCT TGCTATGGAC AAAAGCAATC TCGATAACCT GCAGCGAATG
GCAACACCTG AGCAGCAAAA GCGCCTTGGA TTGTTCATGG ATTATGCGAA AAATTTTGAT
GATGACGAGG TGCCGGACCC TTATTACGGA TTGGGTCACG GATTCGATCT CGTGCTCGAT
ATGGTGGAGG ATGCCTCGCG CGGCTTGATT GAAGAGATCA AGCAAAAGTT GGGGCGAAGT
TGA
 
Protein sequence
MNYRVLLVCM GNICRSPTAE GVLRYFITIN NLGDKVEVDS AGTHGYHVGE APDSRTQRAA 
SVRGYNLSQL RARKVARQDL DYFDLILAMD KSNLDNLQRM ATPEQQKRLG LFMDYAKNFD
DDEVPDPYYG LGHGFDLVLD MVEDASRGLI EEIKQKLGRS