Gene Daro_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2002 
Symbol 
ID3567718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2156184 
End bp2157392 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content61% 
IMG OID637680474 
Productaromatic amino acid aminotransferase 
Protein accessionYP_285218 
Protein GI71907631 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.166981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTT CGATCTTCGC TGCGGTGGAA ATGGCCCCGC GCGATCCTAT CCTGGGTCTG 
AATGAAGCTT TCAATGCTGA TGCGCGCACT ACCAAGGTTA ACCTTGGCGT CGGCGTGTAT
TTCGACGACA ACGGCAAGAT TCCGCTGCTG GCCGCCGTCA AGGCCGCTGA GGACGTCCGC
GTCAAGGCCG CACTGCCGCG CGGCTATCAG CCGATCGAAG GCAATCCGGC CTACAACACG
GCTGTCCAGA ACCTGTTGCT CGGCAAGGAC TCCGCACTGA TCGCCAACGG CCAGGTCATC
ACCGCTCAGG CCCTCGGTGG CACAGGCGCC CTGAAAATTG GCGCCGACTA CCTGAAGCGC
CTGAATCCAA ACGCCAAGGT ATACATCAGC GACCCATCCT GGGAAAACCA TCGCGCCCTG
TTCGAATCCG CCGGCTTCGT CGTAGAAAAC TATCCGTATT ACGACGCCGC CACGCGTGGC
GTTAACTTCG AGGGAATGAA GGCCTGCCTG AAGGGTCTGG ATGCAGGCTC GGTCATCATC
CTTCACGCTT GCTGCCACAA CCCGACCGGC GCCGATTTGT CGGATGCCCA ATGGAGCGAA
GTTGTCGCAA TCTGCCAGGA GCGCGGTTTG GTACCCTTCC TCGACATGGC CTACCAGGGC
TTTGCCGATG GTATCGATGC CGACGCCGTC GCTGTTCGTG CTTTCTCCGC TTCCGGCCTG
CAATTCTTCG CTTCCAGCTC GTTCTCCAAG AACTTCTCGC TTTATGGCGA GCGCGTCGGC
GCCCTGTCCA TCGTCACGGC CGGCAAGGAA GAATCTGCTC GCGTCATGTC GCAGGTCAAG
CGCGTCATCC GCACCAATTA CTCCAACCCG CCGACCCATG GCGGTGCGCT AGTGGCTGGT
GTTCTGGCGT CCGCGGAACT ACGCCAGATG TGGGAAACCG AGCTGGCCGG CATGCGTGAC
CGCATCCGCG CCATGCGCAC CGGTCTGGTC GATGCCATCA AGGCACAAGG CGTGGCGCAG
GATTTCTCCT TCGTTGCCCA GCAGCGCGGT ATGTTCTCCT ATACCGGCCT GACGGCTGCC
CAGGTCGAAC GCATGCGTGA AGAATTCGGC ATCTACGCCG TGTCGACCGG CCGTATCTGC
CTGGCTGCGC TGAATACCAA GAATCTGGAT TACGTGGCCA AGGCGATTGC CGCAGTTACC
AAGCCCTGA
 
Protein sequence
MSSSIFAAVE MAPRDPILGL NEAFNADART TKVNLGVGVY FDDNGKIPLL AAVKAAEDVR 
VKAALPRGYQ PIEGNPAYNT AVQNLLLGKD SALIANGQVI TAQALGGTGA LKIGADYLKR
LNPNAKVYIS DPSWENHRAL FESAGFVVEN YPYYDAATRG VNFEGMKACL KGLDAGSVII
LHACCHNPTG ADLSDAQWSE VVAICQERGL VPFLDMAYQG FADGIDADAV AVRAFSASGL
QFFASSSFSK NFSLYGERVG ALSIVTAGKE ESARVMSQVK RVIRTNYSNP PTHGGALVAG
VLASAELRQM WETELAGMRD RIRAMRTGLV DAIKAQGVAQ DFSFVAQQRG MFSYTGLTAA
QVERMREEFG IYAVSTGRIC LAALNTKNLD YVAKAIAAVT KP