Gene Daro_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1981 
Symbol 
ID3570230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2130902 
End bp2131591 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID637680452 
Productpeptidase M22, glycoprotease 
Protein accessionYP_285197 
Protein GI71907610 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.637689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCC TTGCTCTCGA AACCTCCACC GATCTCGGTT CCTGCGCCTT GTGGCGTGAT 
GGCGTGGTCT CCGAACGCGT TTGCCCACGC GGCAGGTCAC ATTCCGAAAC ACTGCTGCCG
CTGGTCCGCG AACTGTTGCT TGAAGCCGGT GTGAAGGTCG CGCAACTCGA TGCTATTGCC
TTCGGCGTCG GCCCCGGCGC CTTTACCGGC TTGCGCATCG CCTGCGGAGC GGCACAGGGC
TTGGCGGTTG CCGCTAATGT GCCGTTGATT CCGGTAACCA GCCTGGAAAC GATGGCCGCC
ATGGCTGGCG CGGAACGTGT GCTGGCTTTG CTCGATGCAC GCATGGGCGA GGTCTATTCG
GGCCGCTACC GGTTGACTGC GGATAGCTAT GCGCTGGATG GAGAGATTCG TGTTTCGGCA
CCGGGCGATT TGAGCTTGCC GAGTGAATCC GGATGGATTG CCTGCGGCAA TGCGATTGCT
GCCTATCCTG CTCTGGCGGA ACGTTTGAGC GCCGCTGACG TCGCTACTCT GCCTGTGACT
GCGCCGACCG CGGCTGTCGT GGCGCAATTG GCGGCGCCAC GGGCAATGCG GGGTGAAGGG
ATTGATGCTG CGTTGGCGGC ACCACTTTAT GTGCGCGACA AGGTCGCCAA GACGGTGGCC
GAGCGACTCA GCGAAGGCGG GCGGGCGTGA
 
Protein sequence
MLILALETST DLGSCALWRD GVVSERVCPR GRSHSETLLP LVRELLLEAG VKVAQLDAIA 
FGVGPGAFTG LRIACGAAQG LAVAANVPLI PVTSLETMAA MAGAERVLAL LDARMGEVYS
GRYRLTADSY ALDGEIRVSA PGDLSLPSES GWIACGNAIA AYPALAERLS AADVATLPVT
APTAAVVAQL AAPRAMRGEG IDAALAAPLY VRDKVAKTVA ERLSEGGRA