| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1978 |
|---|
| Symbol | |
|---|
| ID | 3570227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 2127549 |
|---|
| End bp | 2128391 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637680449 |
|---|
| Product | HDIG |
|---|
| Protein accession | YP_285194 |
|---|
| Protein GI | 71907607 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.663445 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGC TTCAGGTCGA GCAGATCGTT ACCCGGCTGA TGCAGCTTCC AGCGCTGCCG
ACGGTTGTCG CCGAGTTGCT GGCGTCATTT GGCAATGAGG ACGTCGATAT CGCTCTGCTG
GCCCAGCAGA TATCCCATGA TCAAGCATTG ACAGCGCGCC TGCTTCGGGT CGCCAATTCC
TCGTTTTACG GACTGCAAAG TCGAATATCG ACAATCAATG AAGCAGTGGT TGTCCTCGGC
TTTCGTGCCG TACGCAGCAT GGTGCTGGCG GTGGGCGTGA GCGGTGTTTT TCGTCCAGAG
CATTGCCCGG GTTTCGATCC TCACGCCTAT GTCCGGCATA GCGTTGGCGT TGGTCTGGCT
GCCCGCGCAT TGGCGCAGGC GACTGGTCGA AATCCGGAGT TGGCCTTTAC CGGAGGCATC
CTGCACGATA TTGGCGAGCT GGTGCTGGCC ACGTGCTTCC CCGAGCAGTA TGCCAAGGTG
CTCGCCTATC GAGCGCAACA TGATTGCACG CTGGTCGAGG CCGAGCGCGA CATCATCGGC
CTGGACCATG CCGTGGTCGG CGGCTTGCTG GCTGACGCGT GGCGTTTTCC CGCTTCGTTG
CGTTCGGCCG TCGCTGATCA TCATGCACCG TCTGCGGCAA CGGCCGACTC GCTGGCGGAT
CTGATGCATC TTGCCGACGG CGTCGCCCAT GCTTTGGGCT TGGCGAAAAC CGACAGCGAA
ATGGTGATGC CAGTGGATCA GACTGCTTGG CAGCGCCTGG GGATGGACAG CGAAAAGATC
GCCCGTATTC TGCCGCAGGT GATGAAGGAA ATGGACGAAA CCTGTCAGGC CTTTATCGCC
TGA
|
|---|
| Protein sequence | MSALQVEQIV TRLMQLPALP TVVAELLASF GNEDVDIALL AQQISHDQAL TARLLRVANS
SFYGLQSRIS TINEAVVVLG FRAVRSMVLA VGVSGVFRPE HCPGFDPHAY VRHSVGVGLA
ARALAQATGR NPELAFTGGI LHDIGELVLA TCFPEQYAKV LAYRAQHDCT LVEAERDIIG
LDHAVVGGLL ADAWRFPASL RSAVADHHAP SAATADSLAD LMHLADGVAH ALGLAKTDSE
MVMPVDQTAW QRLGMDSEKI ARILPQVMKE MDETCQAFIA
|
|---|
| |