| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1973 |
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| Symbol | ispD |
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| ID | 3570222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 2122399 |
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| End bp | 2123085 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637680444 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_285189 |
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| Protein GI | 71907602 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 90 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.278739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCACGTC ATTACGCAAT CGTTCCCGCT GCCGGCAGCG GTTCCCGCTT CGGCGCCGAG
AAGCCAAAGC AGTACCTGGA CCTCCTTGGC CGCCCCCTGA TTTTTCACAC TTTGGCCGCC
CTGACTGCCA GCCCGGACAT TGAGCGCGTC TGGGTGGTAC TTGCTCCGGA TGACCCGTGG
TGGCCACGCT ACGACTGGAG CGAACTCGGT TCCAAGCTCG AAACTGTACG CTGCGGCGGG
GCGACACGCG CTGAAAGTGT GAGCAACGGT TTGAGGGCGG CAGCGATGGT TGCTGCAGAC
GATGACTGGG TGCTGGTGCA CGATGCAGCG CGGCCCTGTC TCTCGGCGGC TATGCTCGAT
GCGCTGTTTG CCGAACTGGC CAGCGATCCG GTCGGCGGCA TCCTGGCTGT GCCGGTCGCC
GACACCTTGA AGCGGGCTGA TGCCGAACAG CGTGTCGGCG CCACCGAACC CCGCGATGGT
CTTTGGCAGG CGCAAACGCC GCAAATGTTC CGCTACGGCT TGCTCGGTGA AGCACTGGAA
AAATGTCGTG ACGTGACCGA TGAAGCTGGC GCCATCGAGG CGGTGGGGTT GAAACCCAAG
CTGGTGCGCG GCGATTCGAC CAATCTGAAA GTTACTTATC CGGCCGATCT CGCGCTGGCT
GCGATGATAC TGAGGGCACG CAAATGA
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| Protein sequence | MPRHYAIVPA AGSGSRFGAE KPKQYLDLLG RPLIFHTLAA LTASPDIERV WVVLAPDDPW
WPRYDWSELG SKLETVRCGG ATRAESVSNG LRAAAMVAAD DDWVLVHDAA RPCLSAAMLD
ALFAELASDP VGGILAVPVA DTLKRADAEQ RVGATEPRDG LWQAQTPQMF RYGLLGEALE
KCRDVTDEAG AIEAVGLKPK LVRGDSTNLK VTYPADLALA AMILRARK
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