| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1896 |
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| Symbol | |
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| ID | 3568818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 2036562 |
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| End bp | 2039159 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637680367 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_285112 |
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| Protein GI | 71907525 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATCA ACCTGATCAA CAACATCGCA TTTCTGGTCG CCTTGGTAGC GGCCGGGCTG
ATCGTGCTCA AACGCTTTCG CAAGCACACG CTAAACCGCC AGGTATTGCT GGGCTTCCTG
TTTGGCGGTG TAACCCTGCT CGGCATGCTT AACCCGGTGA ATTTTGCACC GGGGCTCATT
TTTGATGGCC GATCCATCGT GCTCTCGGTG GCAGGCGTCG TCGGAGGTGG GATCACCGCG
GCGATCGCGG TGAGCATGGC CGCTATTTAT CGCTATCAAT TGGGCGGCAT CGGGGCGCCC
GTCGGAATCA CCGTGATACT GCTCTCCGCC CTGCTCGGCG TGCTGGCAAG ACATTGGTGG
CTGCGACGTG AAGTGGCCCC ATCTTCCACG GAATACCTCG CCCTGGGCGT ATTGGTGCAA
CTGGCCCAAC TGGCCACATT CACCCAGATT CCCAATGGCG CGGGCTATCC CTTCATCGAA
CAAGCCTGGT GGATTCTCTT GCTGTTCTAC CCTCCTGCCA CCATGCTGAT GTGCCTGATC
TTTCGTGATC AGGAGCAGCG GATTGAACAG CAGCAGGCGC TGCAAGCCGC ACAGGATGCG
GCAACGCGAG AGCGCTCCAT GCTCCGTACG CTGATCAACA CGCTCCCTGA CCTGATCTGG
CTGAAAGATT CCAAGGGCGT CTATCTGGCC TGCAATCATC GATTCGAGCA ATTTTTCGGC
GCGAGCGAGC CGGAAATCGT CGGCAAGACC GACTACGATT TTGTCGATAA GGCGCTGGCT
GATTTCTTTC GGGCCCATGA TCTCGCCGCG ATGGAAAAGA AAGCCCCCTC GGTCAATGAA
GAAGAAATCA CTTTTGCCGA CGACGGCCAC CGCGAACTGC TGATAACCAC CAAGATCCCG
ATGCTTGACG AAAATAGCCA GCTCGTCGGC GTACTCGGCA TCGGTCACGA CACCACACAG
CAAAAAATGG CTGAGCAGGC ACTGGAAAAC AGTGAACAGC AACTACGCTT TGTCCTCGAG
GGCGCGGAAC TCGGCTTCTG GGATTGGGAT ATCGCTGCCG GCACGGTTTC CCGCAATGAA
CGCTGGGCCA ATATGTTGGG CTATAGCCAT GATGAGATCC GGCAGACGAC CCAACAATGG
ACCGACTTCA TCTTCCCTGA CGACCGCAGT CGGGCCTGGG ACTCAATCAA CGCGGCGCTT
GAAGGCCGGG CCAGCATGCA CCGGCTGGAA TATCGCATGC TGCGCAAGGA TGGCAGCATC
ATCTGGATTC TCGACCAGGC CAAGGTGATG CAACGCGATG CGCAGGGCAA GCCGCTTCGA
ATGTGTGGCA CGCACACCGA CATTTCAGAA ATCAAGGCGA CCCATGAAGA ATTGACGCAG
CACCGCCGCC ATCTTGAGAA ACTTGTTGGT GAGCGTACTC ACGAACTGAC ACTCGCCAAG
GAAGCAGCCG AAACCGCGAC CATCGCCAAG AGCGCTTTCC TGGCGAACAT GAGCCATGAA
ATCCGGACGC CGCTCAATGC AATCACTGGC ATGACCCACA TCCTGCGCCG TTCGGGTCTA
AGCCCCGAAC AAACCGACAA ACTGGACAAG ATCGAAGGCG CCGGCAAACA CCTGCTCGAG
ATCATCAATG CCATTCTCGA CCTATCCAAG ATCGAAGCTG GAAAACTCAC CCTTGAGTCA
GTACCAGTCC ACGTCGGCAG TTTGCTGGAA AACGTTGCCT CGATGCTGAG CCAAAGGGCC
AGAGCCTTAG GCATTGCGAT CAACCTGGAA CCGATCACGA TTTCCTCCCC TCTCCTGGGC
GATCCCACGC GGCTCCAGCA AGCCCTGCTC AACTACGCGA CCAATGCCCT GAAATTTACC
GAACAGGGCC ATATCACCCT GCGTGTGAAG GAGGAGGCTC AGACCGAAGA GCGTGTGACG
CTGCGCTTCG AAGTGTCAGA TACCGGAGTC GGCATAGCAC CCAATATCCT GCCCAAGCTG
TTCGGCACCT TCGAGCAAGC CGACAACTCG ACCACGCGCA AATATGGCGG CACCGGGCTG
GGCCTGGCGA TCACCAAAAA GCTTGCCGAA CTGATGGGCG GTACGGTCGG CGTAAGCAGC
ATCGAGGGAC AGGGGAGCAC CTTCTGGTTT TCCGCGGTCC TCGCCAAGGC TGAGCAGACC
AGCGACACTC TACACAGGGC AGACATCGAG GAAGCCGGAC AGACAATTCG GCAGAACCAT
GCCGGCAAAC GCATCCTGCT GGCAGAAGAC GAACCCATTA ATCAGGAAAT CGCCCAGGTG
CTGCTGGAGG AGGTCGGACT GACAGTCGAT TTCGCCGCAG ATGGCCAGGA GGCTGTCGAA
AAAGCGACTG CCGGCCGCTA CGACCTGATT TTGATGGACA TGCAGATGCC ACATCTGGAT
GGCCTGGAAG CGGCCCGCCA GATTCGGCTA ATCCCTGAAT ATGCAGCCAC CCCTATCCTG
GCGATGACGG CGAATGCCTT TGCTGAAGAC AAGGCGCGAT GCTTCATGGC CGGCATGGAT
GATTTCATCG CCAAGCCGGT GAGCCCGGAT GTCTTTTACC AGACGCTGCT GAGGTGGTTG
GACAACTCAC CAGGCTGA
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| Protein sequence | MLINLINNIA FLVALVAAGL IVLKRFRKHT LNRQVLLGFL FGGVTLLGML NPVNFAPGLI
FDGRSIVLSV AGVVGGGITA AIAVSMAAIY RYQLGGIGAP VGITVILLSA LLGVLARHWW
LRREVAPSST EYLALGVLVQ LAQLATFTQI PNGAGYPFIE QAWWILLLFY PPATMLMCLI
FRDQEQRIEQ QQALQAAQDA ATRERSMLRT LINTLPDLIW LKDSKGVYLA CNHRFEQFFG
ASEPEIVGKT DYDFVDKALA DFFRAHDLAA MEKKAPSVNE EEITFADDGH RELLITTKIP
MLDENSQLVG VLGIGHDTTQ QKMAEQALEN SEQQLRFVLE GAELGFWDWD IAAGTVSRNE
RWANMLGYSH DEIRQTTQQW TDFIFPDDRS RAWDSINAAL EGRASMHRLE YRMLRKDGSI
IWILDQAKVM QRDAQGKPLR MCGTHTDISE IKATHEELTQ HRRHLEKLVG ERTHELTLAK
EAAETATIAK SAFLANMSHE IRTPLNAITG MTHILRRSGL SPEQTDKLDK IEGAGKHLLE
IINAILDLSK IEAGKLTLES VPVHVGSLLE NVASMLSQRA RALGIAINLE PITISSPLLG
DPTRLQQALL NYATNALKFT EQGHITLRVK EEAQTEERVT LRFEVSDTGV GIAPNILPKL
FGTFEQADNS TTRKYGGTGL GLAITKKLAE LMGGTVGVSS IEGQGSTFWF SAVLAKAEQT
SDTLHRADIE EAGQTIRQNH AGKRILLAED EPINQEIAQV LLEEVGLTVD FAADGQEAVE
KATAGRYDLI LMDMQMPHLD GLEAARQIRL IPEYAATPIL AMTANAFAED KARCFMAGMD
DFIAKPVSPD VFYQTLLRWL DNSPG
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