Gene Daro_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1862 
Symbol 
ID3569558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp2001582 
End bp2002409 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content58% 
IMG OID637680333 
ProductABC-type phosphate/phosphonate transport system periplasmic component-like protein 
Protein accessionYP_285078 
Protein GI71907491 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.00692e-20 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGAT TTTTCCCCCT ATGTCTGATT CCACTGGCCC TTGGCGCTAA TGCCGCCGAG 
TCTCAGCACT CTGCCAGAAA AGCTTTGATC TTCGCGGTTA GTGAAGGCAC CTCCGGCGGC
ATCGATGCCG AGGCCGCCCG CGTCAAGTAC CAGCCTTTGG CAGACGTGCT CGCACGTGCC
ATCGGCGGCG AAGTCAAGGT CGCTTTTGTC CGCGAATTCT CAGCGCTCGA AAAGGGCATG
AAGGATAACC AGTACGATCT TGTGCTGGCC CGTCCGTCCG ATTATCCAGC ACGCGGCCTG
CGCGATTACC GCTACAAGTT TGTGGCCACA GCCAGACCGG ACGGCCAATG CATATTGATC
GTGCACAAGG ATTCGCCAGT CAAGAAGCTT GCCGACCTCA AGGGCAAGAG CTTCGTGATG
CCTGAGAAAA ATGCCTACAT GACGCGCTTC TGCCGGGCCG AACTGCGCGA CCAGGGCATC
ATCCTGGACA ACGAAGCGGT CAGCTATGTT CGCGAGCAAG GTGCCATTCC GTTCTCAATC
GAAAACCGGA TTTCCGATGT CGGCGGCATC GCCTCGTACT CCGGTGCATA TGCCCAGTGG
CTCAAGTCAG GCAACCGCGT TATCCATCAA TCCAGGCCGC AGCCGTACAT GCCGCTCGTC
GCGTCGCAGG ATGTGAGTGT TGATCAGATC GCCAAGATGC AGGCGGCACT GGTCGAGTTG
GGCAACTCCG ATAGCGGCAG CCAAGTGCTG AAGCGTGTTG GTGTCACCGG CTTTATGGCC
ACCGAGGAAA GCCGGCTGCG CAAGCTGCTG GAGTGGCTAG GCGTTTAA
 
Protein sequence
MRRFFPLCLI PLALGANAAE SQHSARKALI FAVSEGTSGG IDAEAARVKY QPLADVLARA 
IGGEVKVAFV REFSALEKGM KDNQYDLVLA RPSDYPARGL RDYRYKFVAT ARPDGQCILI
VHKDSPVKKL ADLKGKSFVM PEKNAYMTRF CRAELRDQGI ILDNEAVSYV REQGAIPFSI
ENRISDVGGI ASYSGAYAQW LKSGNRVIHQ SRPQPYMPLV ASQDVSVDQI AKMQAALVEL
GNSDSGSQVL KRVGVTGFMA TEESRLRKLL EWLGV