Gene Daro_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1855 
Symbol 
ID3569551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1994787 
End bp1996703 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content62% 
IMG OID637680326 
Productradical SAM family protein 
Protein accessionYP_285071 
Protein GI71907484 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.357803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCTG CCGATACCAC CCGCCCGCGC ATCCTCTCGG TCATCCCGCC GATGACGCAG 
TTGAATACGC CCTACCCGGC TACCGCCTAC CTGACTGGTT TTCTGCGCTC GCGCGGTTTT
CAGTCCGAAC AGACCGATCT GGCACTGGCC TTGGTGCTTG AACTGCTGTC GCCGACAGGT
CTACCGAAGA TCAAGGCAGC CGCCGAAGCC ATTGCCGGCA AGAAGCGCTC GAATACGCTG
AAGATTTTCC TCAACGAGTT CGACCGTTAC CTCGCCTCGA TCGGCCCGGC CATTGCCTTG
CTGCAAGGTC GTGACGGCTC GATTGCCCAC CGCATCTGCA GCCGCGCCTT CCTGCCCGAA
GGACCGCGTT TCGCCTCGCT CGACAACTAC ATCGACGAAG ATGGCGGCGA CCCGCTGGCT
TGGGCCTTCG GTTCCCTCGG CGTGCAGGAC CGGGCGCGGC ATCTGGCCAC GCTGTACCTG
AACGATCTCG CCGATGTGCT GCGCGAGGCC GTCGATACCC GCTTCGAATT CGTCCGCTAC
GCCGAGTCGC TGGCCCAGAG CCAGGCCAGT TTCAACCCGC TGGCGACGGC ATTGGCCGCG
CCGAAAACGC TGGTCGATGA AACGCTGGAA AAGCTGACCC TGCAAGCCAT TGAGCGCAGC
CAGCCAGAGG TTGTGCTGAT TTCCGTGCCC TTTCCTGGCT CGGTCTATGC CGCCTTCCGC
ATTGCGCAGA CGATCAAGGC CAAAAACCCG AAGATCGTCA CCGTGCTCGG TGGCGGCTAC
GTCAATACTG AGTTGCGCGA ACTGGCCGAA CCCCGCGTCT TCGACTATTT CGATTACGTC
ACCCTCGATG ATGGCGAGAT GCCGCTACTG GCGCTGTTCG AACATCTGGC CGGCAAGCGC
CCGCGCCTCA ACCTCGTCCG CACCTTCACC CGCGTCGATG GCGCCGTCCG CTACTTCAAC
ACTGGCGAGG CGGACATCCC CTTCGAGGAA GTCGGCACGC CGACCTGGGA TGGCCTGCCG
CTCGACCACT ACCTGTCGCT GCTCGACATG CTCAATCCCA TGCACCGGCT TTGGTCGGAC
GGGCACTGGA ACAAACTGAC TGTTGCCCAT GGCTGCTACT GGAAGAAATG CAGCTTCTGC
GACGTCAGCC TCGACTACAT CGGCCGTTAC GACGCGGCCA GCGCCAAGGT GCTGGTCGAC
CGCATCGAGC AGATCATCGC CGAAACCGGC CATACCGGTT TTCATCTCGT CGACGAAGCC
GCCCCCCCCA AGGCGCTGCG GGCGCTGGCC GAAGAGTTGC AGCTGCGCAA CCTGGCGATT
TCGTGGTGGG GCAACATCCG CTTCGAAAAG TCCTTCACGC CGGAACTCTG CCTGCAACTG
GCCGATAGCG GATGCATCGC CATCTCCGGC GGACTGGAGG TTGCCTCCGA CCGCCTGCTC
GACCTGATGA AAAAAGGCGT CTCGGTCGAT CAGGTCGCCC GCGTCACCCG TGCCTTCACC
GATGCGGGGG TGCTCGTCCA TGCCTACCTG ATGTACGGCT TTCCGACACA AACGGTTCAG
GATACGGTCG ATGCGCTCGA ATACGTCCGC CAGCTATTTG CCGAGGGCTG CATCCAGTCC
GGTTATTTCC ACCGCTTCGC CTGCACGGTG CATTCGCCCG TTGGCATGAA TCCGGCCGAA
TACGGCATCA AACTGCAGCC GCTACCGCCC GGGAAGTTCG CCAAGAACGA TGTGCAGTTC
ATCGACCCGA CCGGCGTCGA TCACAACAGC CTGGGCAAGG CGCTGAACAA GGCGCTTTAC
AACTACATGC ACGGCATCGG GCTGGATAGC GACGTGCGCA GTTGGTTCAG CGAAAAAGTG
CCGCGCCCGA CCGTGGCTCG TCACAAGATT TCGAAGGCGC TGTCAGGCCA GTTTTAA
 
Protein sequence
MISADTTRPR ILSVIPPMTQ LNTPYPATAY LTGFLRSRGF QSEQTDLALA LVLELLSPTG 
LPKIKAAAEA IAGKKRSNTL KIFLNEFDRY LASIGPAIAL LQGRDGSIAH RICSRAFLPE
GPRFASLDNY IDEDGGDPLA WAFGSLGVQD RARHLATLYL NDLADVLREA VDTRFEFVRY
AESLAQSQAS FNPLATALAA PKTLVDETLE KLTLQAIERS QPEVVLISVP FPGSVYAAFR
IAQTIKAKNP KIVTVLGGGY VNTELRELAE PRVFDYFDYV TLDDGEMPLL ALFEHLAGKR
PRLNLVRTFT RVDGAVRYFN TGEADIPFEE VGTPTWDGLP LDHYLSLLDM LNPMHRLWSD
GHWNKLTVAH GCYWKKCSFC DVSLDYIGRY DAASAKVLVD RIEQIIAETG HTGFHLVDEA
APPKALRALA EELQLRNLAI SWWGNIRFEK SFTPELCLQL ADSGCIAISG GLEVASDRLL
DLMKKGVSVD QVARVTRAFT DAGVLVHAYL MYGFPTQTVQ DTVDALEYVR QLFAEGCIQS
GYFHRFACTV HSPVGMNPAE YGIKLQPLPP GKFAKNDVQF IDPTGVDHNS LGKALNKALY
NYMHGIGLDS DVRSWFSEKV PRPTVARHKI SKALSGQF