| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1772 |
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| Symbol | |
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| ID | 3567830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1907557 |
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| End bp | 1911066 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637680241 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_284989 |
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| Protein GI | 71907402 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.914739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAT TTCAGCTCCA AGCCAACCAA AGAACCTACA ACCTCGCTGC ACTAGGGTTC
TTCGTCATCA TGGTTGCGGC AATGGTCGTC AATGCGCTGA TCGTCAACTA CAACCCGGAA
ACTCGTTCGT TCATCGCTAG CGGCGAGACT CATTTCCGGT TCTACGGCGT GTTGCTTGGG
CTCGTCATGG CTGCTGCACT GTTCTTGAGT TACCACCGTG GCAACACTTT GGCACTCAAG
CTGAGCACCT TGATTGCCAT CATCACTGTT ACATCGGGTT TGCAACTGCG GGCATTCGAT
TTCGCGGTAC CACAAGCAAT CTGGATTCCC TTCATCCTGG CGCTGGCCGT CACCAATATC
CGATGGTCGC TTTTCGTTTT TGCAATAACG GTAGCACTCA CCTGCTACCG CTTTCCCAAC
GCCTTTCAGA GTCCGCTTGG CGCCCAGGTG ACTGCGATCA TTCTCACGCT GCTCACGGTC
AGCCGTCTCG TGCAGGATTT GCTGGTAAAA AATGCCACGA AGGCAGAGCA GAAGGCTCGC
GACATGGCGG CCGACATCGC CTGCAAAAAC CAGCAGCTCA AGGAAAGCCA GGATGCACTT
GATGCCACGC TGGCCGCCAT TCCGGACATT CTGTTCGAGA TGGACGAAAT CGGCACCTAT
CTTGCCATTC GCACCAATGA CGAGCACTTG CTCGCGGCCT CAAAAAATGA ACTGATGGGC
CGTACTGTAA GCGATGTGTT ACCACCACAA GCGGCAGCCG TCGTTCATCA AGCCTTGGCC
GAGGCAAAAC GGCAGGGAAA GAGTTACGGC CGAGTGATCA AGCTGCCATT GGCGCAAGGT
GATGCCTGGT TCGAATTGTC GGTGGCGAGG AAAGACCGCA CGGACATGGA GGGAAGTCGC
TTCATTGTGA TTAGCCGCGA CATCACCAGT CGCCATCGGG CCGAGGAAGA AGCCCAGCGC
CTCTCTCAGG TCATTGAGCA AAGCCCCGAG TCCATCGTTA TTACGGACCT GAAGACACAC
ATAATTTATG CAAATTCGGC GTTTAAAGAC GCCTCCGGCT ACACCGTCGA GGAGGCCATC
GGTCGGCCTG CAGCCTTCCT CGGTTCGGGG CGCACGCCCG CTGCCACCAA AGATGTCATG
TGGTTCACCC TGGAGCAAGG CAAAGTCTGG CAAGGTGAAT TCATCAACCG CCGCAAGGAT
GGCAGCGACT ATCTGGAGCA AGTGATCATC TCGCCCCTGC GCGACTCTTC CGGAGAGGTA
ACGCACTATG TGGCCATCAA ACGGGATATC ACCACACTGC GGCAGCAAGA GCAGGAAATC
GCACGCGACA GGAAACGATT GATCAACGTG CTGTCAGGGA CGGGAGCCGG CCCCTGGGAA
TGGGATATCG ACTCCGGGAA ACTGATACTG GATGGCGCCT CCAGCAATCT GGTCGGGCGC
TCCCTCGCCG AATTTGGAGA TGATCACCTG GAGGCCTGGT TCAGCCGTAT CCATCCGGAA
GATCGACTGG TTCTGGAAAA AAGCTTGGCC GACCATCTGG CGGGTGACAG CGAGCGATTC
GAGATTGAAT ACCGTATCCA GCATGCCGAC CAGCGCTGGG TCTGGATTCA AGTGCGCGGC
AAGGTGATTG ACTGGAGCAA GGACAGAAAG CCGCTGACCA TGTACGGCGT GCATCTGGAT
ATTACTGCCC ACAAACAGGC TGAAGAGCAA CGCCAATATC TGGAGAGCAT CCTTCATTCG
GCCATCGAGG CCATCGGGGA AGGTTTTTCA GTGTACAACG CGGCGGATCG ACTGACCTGG
TGCAATGAGC AGTATCGTCG CTTGTATACC ATTTCCGCCC CCGCCTTCGT TCCCGGCAAC
TCGTTCGAAG AAATCATCCG CTACGGTATC GAGCATGGCC AATACCCAGA AGCGCAGGCC
AACCCGGAAG CCTGGGTTCA AAGACGGCTT TTAGCCCACC GGCAAAGTGA ATCCAATTTC
ATTCAAAAAC TGGCTGATGG CCGTTGGCTG GATGTCCGGG AACGCAAAAC CGCCGATGGC
TCGATCGTCG GCTTTCGGGT AGACATTACC GAATTGATGC ATGCCAAGCA GGCAGCCGAG
GCGGCAAACC GTGCCAAGAG CGAGTTCCTG GCCACAATGA GTCACGAAAT TCGCACACCG
ATGAACAGTA TCCTGGGCAT GGCTCAGATA CTCTGCGGCC CGGATGTATC GGACCCGCGC
AGCCGGGATT ACGGGCGCGT CATCCTCGAA TCGGGAAAAA CCCTGCTCAC CATTCTCAAT
GACGTGCTCG ATCTGGCCAA AGTGGAGTCT GGGCGCGTTG AACTGGATCC GACCCCCTGG
CTACCGCAAC AACTGGCTCA GGACATCCTG GCGCTATTCC GGGGCGTCGC TCAGGGCAAA
GGTCTGATCA TCTCCGCGGA GTGGGATGGA CCGCGCACTC AGGAATATCT GGCCGACGGC
TACCGCCTGA AGCAGATGCT CTCGAATCTG GTCTCGAATG CCTTAAAGTT CACGGCGATT
GGTTCAGTCG ACATCCGCAT CTCCGAAATC GACCGCACCA ATGACTTCGC AACGCTCGAA
TTTTCCGTGA CCGATACAGG TATCGGTATT TCCTCCGAAA AACAGCAGGG GCTCTTCCAG
CCCTTCACGC AGGCCGACGG TTCCACCACC CGGCGCTACG GCGGCAGTGG GCTGGGCCTG
TCTATCGTTC GCCATCTGGC GGAACTGATG GGAGGTGAAG CCGGGCTGGA AAGCGAGGAG
AAAAAAGGCA GCCGCCTGTG GTTCCGTATT CCAGCCCCAC TGGCAACAAG CACCTCGGCC
GCCAACGAAT CGAATGCCAC CAGCCAGGCG CAGTCCGGGC TTGTACCCAG CTTCTCCGGA
TCCGTTCTGG TTGCCGAGGA CAATGCGCTG GAGCGCAAAG TACTTGGCAC ACTCTTGAGC
CGCCTCGGCC TCTGTGTCAC ATTCGCCACG GATGGTCGCG AAGCGGTCAG CGCTGCATGC
GCCGATGATC GCCCCGACAT GATCCTGATG GATTGCCTGA TGCCTGGGCT CGACGGCTAT
GCTGCCGCAC GGGAAATTCG CGAGCATGAA GCGCAATGCG GACTCCCCCG CATTCCGGTC
GTCGCCATCA GCGCTTCGGT CTTTGCCGAA GATCGCGAAT GTTGCCTGCA AAGCGGGATG
GATCATTTCC TGCCCAAGCC CTTCGTCGTG TCGGATCTGC GCCGAATTCT CGTCGACGTC
TTGGCCCCGG AGGCCGCTCC GGCAGGAACA CCCGGCATTT GCGCTGCCAA GACCACGATA
TTCGACCGGG CGCAATTGCG GCGTGCCATC GAGGCGCTCA TACCGCTGCT TGAATTGGGC
AAATTCGATG CACTCCAACG CTTCTCCGAG CTGCAATCGA GTGCCATCAA CACGGATATC
GCCGACGAAA TCGACGAAAT CGCAGACTCA GTCAAGACCT TTCAGTTCCA AGCCGCACTG
GGCCGCCTGC GTGCCCTGGT CAATGGCTAG
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| Protein sequence | MKLFQLQANQ RTYNLAALGF FVIMVAAMVV NALIVNYNPE TRSFIASGET HFRFYGVLLG
LVMAAALFLS YHRGNTLALK LSTLIAIITV TSGLQLRAFD FAVPQAIWIP FILALAVTNI
RWSLFVFAIT VALTCYRFPN AFQSPLGAQV TAIILTLLTV SRLVQDLLVK NATKAEQKAR
DMAADIACKN QQLKESQDAL DATLAAIPDI LFEMDEIGTY LAIRTNDEHL LAASKNELMG
RTVSDVLPPQ AAAVVHQALA EAKRQGKSYG RVIKLPLAQG DAWFELSVAR KDRTDMEGSR
FIVISRDITS RHRAEEEAQR LSQVIEQSPE SIVITDLKTH IIYANSAFKD ASGYTVEEAI
GRPAAFLGSG RTPAATKDVM WFTLEQGKVW QGEFINRRKD GSDYLEQVII SPLRDSSGEV
THYVAIKRDI TTLRQQEQEI ARDRKRLINV LSGTGAGPWE WDIDSGKLIL DGASSNLVGR
SLAEFGDDHL EAWFSRIHPE DRLVLEKSLA DHLAGDSERF EIEYRIQHAD QRWVWIQVRG
KVIDWSKDRK PLTMYGVHLD ITAHKQAEEQ RQYLESILHS AIEAIGEGFS VYNAADRLTW
CNEQYRRLYT ISAPAFVPGN SFEEIIRYGI EHGQYPEAQA NPEAWVQRRL LAHRQSESNF
IQKLADGRWL DVRERKTADG SIVGFRVDIT ELMHAKQAAE AANRAKSEFL ATMSHEIRTP
MNSILGMAQI LCGPDVSDPR SRDYGRVILE SGKTLLTILN DVLDLAKVES GRVELDPTPW
LPQQLAQDIL ALFRGVAQGK GLIISAEWDG PRTQEYLADG YRLKQMLSNL VSNALKFTAI
GSVDIRISEI DRTNDFATLE FSVTDTGIGI SSEKQQGLFQ PFTQADGSTT RRYGGSGLGL
SIVRHLAELM GGEAGLESEE KKGSRLWFRI PAPLATSTSA ANESNATSQA QSGLVPSFSG
SVLVAEDNAL ERKVLGTLLS RLGLCVTFAT DGREAVSAAC ADDRPDMILM DCLMPGLDGY
AAAREIREHE AQCGLPRIPV VAISASVFAE DRECCLQSGM DHFLPKPFVV SDLRRILVDV
LAPEAAPAGT PGICAAKTTI FDRAQLRRAI EALIPLLELG KFDALQRFSE LQSSAINTDI
ADEIDEIADS VKTFQFQAAL GRLRALVNG
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