| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1673 |
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| Symbol | |
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| ID | 3568566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1798600 |
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| End bp | 1799790 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637680140 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_284890 |
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| Protein GI | 71907303 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.801945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCA GCCAGGTCAT TAGCCGAAAG CTTGGACTCG GGCTTTTTGC CGCAATGCTT
GTCGTTGGAT TTGGCGTGAT TGTCGCCCGC TCAGGTCCGT TATCTCCCAT CCAGGTCACC
ACACTCCGTG TGGAGTCGGG GTCGCTGTCA TCAGCGATAT TTGGTATTGG CACGGTCGAA
GCCCGCCGTA GTTATTTCAT TGGCCCAACG GCTGCGGGGC GCGTCAAATC TGTGCATGCG
GATGTGGGCG AAACGGTCAA GGCCAGGCAG TTGCTGGCGG AAATCGACCC TGTGGACCTG
GATGAGCGCC TTCGTTCGAC AGAAGCCGCT TATGCCCGGG CTGCCAGTGC CGTCATCGCC
GCCGAAGCAC AACGAAAAGA TGCGATAGCC AGACGGCAAC TCGCCGAGCT AAATGCCAAA
CGCTATCGCG ACCTGGGTGG AAAGAATTTC GTCAGCCCCA GCGCAGTGGA AGGCAAGCAG
CAGGAACTTG ATTCGGCTCA GGCAGCACTT GAGGCCAGTG AGGCCAACCT ACTGGGCGCC
CGCCAAGAGC AACTTCGGCT GAAAGCTGAC CAGGATGGCA TCCGCCAACA ACGTGGCAAC
CTTCGTCTGC TGGCCCCGCG GGATGGCCTA GTGATTAGCC GCGACGCGGA ACCAGGTTCG
ACGGTCATTG CCGGCCAGGC GGTCCTCCGC CTTGTTGAGC CTGACAGTCT CTGGGTCAAG
GCCCGCCTCG ACCAGGGGCG CTCGCGCGGC CTGGCCGTAG GACAAGCCGC AGATATTGTG
TTGCGCAGCA ATGTCTCTAC GCCCCTCCCT GGAAAGGTGG CGCGCATCGA GCCGGTGAGT
GACAGCGTCA CGGAGGAGCG CATCGCTCAA ATCGCATTCG AGCGCATCCC AGAAGGACTG
AGCGTTGGCG AGATGACCGA AGTGACGGTG AAGACCGGTG AAGCTAAATC CGGGTTGCTG
CTTCCGAATG CCGCCATCAA ACAGATGCCC CAAGGCAGCG GTGTCTGGAA GCTCAAGGAC
GGCAAGCCAA GCCTGACCCC GGTGAAGCTG GGCAGCAACA GCCTTGATGG CAACGTACAG
ATTCTCGACG GCTTGGTTGC AGGCGACGAG GTGGTCATTC ATAGCGAGCG CGACCTCAAC
GAGGGCGCCC GCATCAAGGT CGTCAACCAA CTCGTGGGGA AACCGAAGTG A
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| Protein sequence | MKPSQVISRK LGLGLFAAML VVGFGVIVAR SGPLSPIQVT TLRVESGSLS SAIFGIGTVE
ARRSYFIGPT AAGRVKSVHA DVGETVKARQ LLAEIDPVDL DERLRSTEAA YARAASAVIA
AEAQRKDAIA RRQLAELNAK RYRDLGGKNF VSPSAVEGKQ QELDSAQAAL EASEANLLGA
RQEQLRLKAD QDGIRQQRGN LRLLAPRDGL VISRDAEPGS TVIAGQAVLR LVEPDSLWVK
ARLDQGRSRG LAVGQAADIV LRSNVSTPLP GKVARIEPVS DSVTEERIAQ IAFERIPEGL
SVGEMTEVTV KTGEAKSGLL LPNAAIKQMP QGSGVWKLKD GKPSLTPVKL GSNSLDGNVQ
ILDGLVAGDE VVIHSERDLN EGARIKVVNQ LVGKPK
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