Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1672 |
Symbol | |
ID | 3568565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1797410 |
End bp | 1798603 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637680139 |
Product | hypothetical protein |
Protein accession | YP_284889 |
Protein GI | 71907302 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.807397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTAGCC TAGCCGGGCG GGACATCCTG CACTCCTGGT CAAAATTCGT CCTGACCGGT ATCGGCCTGG GTTTGTTGAT TGGTGTAACT CTGACCATGG CTGGCGTTTA TCGCGGTATG GTCGATGATG CCAAGGCGCT GCTCAACAAC AGCGGAGCCG ACATTTGGGT GGTGCAACAG GACACCCAGG GGCCGTACGC CGAGTCGTCG AGTCTGCGCG ATGATGTTTA TCGGGCCTTG CTGGCGTTGC CAGGGATTTT CCGTGCGGCC AATGTCACCT ATTTGACGAT GCAGGTCCGC CTTGGCAACA CCGATGTTCG GGCCATGGTA GTCGGCTTCG AACCCGGGCA GCCGGGCGAG CCCGGTTATC TGGTCGCCGG CCGGCAGATT ACTCGCAGCC ATTACGAAGC AGTAGCCGAT GTGAAGACCG GCTTTCAATT GGGCGACACG ATACGTATCC GCCGCCACGA CTATCGCGTG GTTGGCCTGA CCCGGCGGAT GGTCTCGTCA GGCGGCGACC CGATGGTCTT CATCCCGCTC AAGGATGCTC AGGAAGCACA GTTTCTCAAG GACAACGACG CCATTCTCAA CGAGCGGGCC CGCACCACGA GCAATCCCAC CCTGAACCGA CCCGGCGTAC CGGGATTGCT CGATGCCATC CTGGCTTCAC AGAACGCCAA TCACAACGTC AATGCGGTAC TGGTTCAGAT TGCCCCAGGC ACCGAGTCGG AACATGTGGC AAGTGAGATT CGACGCTGGA AGCATCTGCA GGCCTTTACG CGCACCCAAA TGGAAGAGAT TCTGGTTTCC AAACTTATTG CAACATCGGC CAAACAGATT GGCATGTTCC TGGTCATCCT GGCCGTCGTC AGCGCCGCCA TCGTTGCATT CATCATCTAC ACCATGACCC TCGGCAAGAT ACGGGAAATC GCGGTGCTGA AGCTCATAGG CACACGCAAT CAGACGATTG CCGGCATGAT TTTGCAACAG GCCATGGGCC TCGGCCTCAT TGGTTTTATG GTGGGCAAAA CCGCCGCAAC AATCTGGGCT CCATTTTTCC CGAAATTCGT CCTGCTCGAA CCCGGCGATG CGGCACAGGG ATTCCTCGTG GTGATGCTCA TTTGCGCCCT GGCCAGCACG CTGGCTATCC GAGTGGCTTT GCGTGTCGAC CCGGCAACGG CCATAGGAGG CTAA
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Protein sequence | MISLAGRDIL HSWSKFVLTG IGLGLLIGVT LTMAGVYRGM VDDAKALLNN SGADIWVVQQ DTQGPYAESS SLRDDVYRAL LALPGIFRAA NVTYLTMQVR LGNTDVRAMV VGFEPGQPGE PGYLVAGRQI TRSHYEAVAD VKTGFQLGDT IRIRRHDYRV VGLTRRMVSS GGDPMVFIPL KDAQEAQFLK DNDAILNERA RTTSNPTLNR PGVPGLLDAI LASQNANHNV NAVLVQIAPG TESEHVASEI RRWKHLQAFT RTQMEEILVS KLIATSAKQI GMFLVILAVV SAAIVAFIIY TMTLGKIREI AVLKLIGTRN QTIAGMILQQ AMGLGLIGFM VGKTAATIWA PFFPKFVLLE PGDAAQGFLV VMLICALAST LAIRVALRVD PATAIGG
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