| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1627 |
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| Symbol | |
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| ID | 3568460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1746729 |
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| End bp | 1748261 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637680094 |
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| Product | fumarase |
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| Protein accession | YP_284845 |
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| Protein GI | 71907258 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 0.940644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.375003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA TCAAACAGGA AGACCTGATC CAGTCCGTCG CCGATGCCTT CCAGTACATC
AGCTACTATC ACCCGCTCGA TTACATCAAG GCGCTGGGTG AAGCCTATGA TCGCGAGGAA
AGCCCCGCTG CAAAGGACGC CATCGCCCAG ATCCTGACCA ATTCGCGGAT GTCCGCCGAA
GGCCATCGCC CGATCTGTCA GGACACTGGT ATCGGCATGG TTTTCATCAA GGTCGGCATG
CAGGTTACCT GGCCGGATGC CACCATGAGC ATCCAGCAGA TGATCGACGA AGGCGTGCGT
CGCGCCTACG GCAACCCGGA CAATCCGCTG CGCGCCTCGG TGCTGGCCGA CCCGGCCGGT
GCCCGCAAGA ACACCAAGGA CAACACCCCG GCCGTCGTGC ATTTCGAGAT CGTCCCCGGC
CACCATGTTG AAGTCATCTG CGCCGCCAAG GGCGGCGGCT CGGAAGCCAA GTCCAAATTC
GCCATGCTCA ACCCTTCCGA CGACCTGGTC GACTGGGTGC TCAAGAAGAT CCCGGAAATG
GGCGCCGGTT GGTGCCCGCC CGGCATCATC GGTATCGGGA TCGGCGGCAC GCCGGAAAAG
GCCATGCTGC TGGCCAAGGA ATCGATCATG GCGCCGGTCG ACATCCATGA ACTGAAGGCC
AAGGCGGCCA CCGGCACCAA GCTGACCCGT CCGGAAGAAT TGCGCCTCGA ACTGATGGAA
AAGATCAACG CGCTGGGCGT TGGCGCCCAA GGCCTCGGCG GCCTGACCAC CGTGCTCGAC
GTCAAGGTGC TGGATTACCC CTGCCACGCT GCCAACCTGC CGGTCGCCCT GGTCCCGAAC
TGTGCTGCAA CCCGCCACTG CCATTTCCAC CTCGACGGCT CCGGCCCGGC CAAGCTGGAA
GTGCCGAAGC TCGAAGACTG GCCGGCCGTC ACGTGGACGC CGGATCTCAA GTCAGCCACG
CAGGTCAACC TGAACACCCT GACCAAGGAC GAAGTCGCTT CCTGGAAGCC GGGCCAGAAA
CTGCTGCTCA ACGGCAAGAT GCTGACTGGC CGCGATGCCG CCCACAAGCG CATTCAGGAC
ATGCTGGCCA AGGGCGAGAA GCTGCCGGTA GATTTCACCA ACCGCGTCAT CTACTACGTC
GGCCCGGTCG ATCCGGTGCG TGACGAAGTC GTCGGCCCGG CCGGCCCGAC CACCGGCACC
CGCATGGACA AGTTCACCCG CATGATGCTG GAACAGACCG GCCTGATCTC GATGATCGGC
AAGTCCGAAC GCGGTCCGGT CGCCATCGAG GCGATCAAGG ACAACAAGTC GGCCTACCTG
ATGGCTGTCG GCGGCGCTGC CTACCTGGTT GCCAAGGCGA TCAAGTCGGC CAAGGTCGTC
GGCTTTGCCG ATCTGGGCAT GGAAGCCATC TACGAGTTCG ATGTCGAGAA CATGCCGGTC
ACAGTGGCCG TCGATTCATC AGGCATCAGC GTGCACGAAA CCGGCCCGAA GGAATGGCAG
GTCAAGATCG GCAAGATTCC GCTCAAGGCC TGA
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| Protein sequence | MTAIKQEDLI QSVADAFQYI SYYHPLDYIK ALGEAYDREE SPAAKDAIAQ ILTNSRMSAE
GHRPICQDTG IGMVFIKVGM QVTWPDATMS IQQMIDEGVR RAYGNPDNPL RASVLADPAG
ARKNTKDNTP AVVHFEIVPG HHVEVICAAK GGGSEAKSKF AMLNPSDDLV DWVLKKIPEM
GAGWCPPGII GIGIGGTPEK AMLLAKESIM APVDIHELKA KAATGTKLTR PEELRLELME
KINALGVGAQ GLGGLTTVLD VKVLDYPCHA ANLPVALVPN CAATRHCHFH LDGSGPAKLE
VPKLEDWPAV TWTPDLKSAT QVNLNTLTKD EVASWKPGQK LLLNGKMLTG RDAAHKRIQD
MLAKGEKLPV DFTNRVIYYV GPVDPVRDEV VGPAGPTTGT RMDKFTRMML EQTGLISMIG
KSERGPVAIE AIKDNKSAYL MAVGGAAYLV AKAIKSAKVV GFADLGMEAI YEFDVENMPV
TVAVDSSGIS VHETGPKEWQ VKIGKIPLKA
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