Gene Daro_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1425 
Symbol 
ID3569071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1552281 
End bp1552967 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content62% 
IMG OID637679893 
Producturease accessory protein UreF 
Protein accessionYP_284644 
Protein GI71907057 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAACCT GCCTCCAACT TGCCCGTCTG CTGCAACTGG CCAGCCCGAC GCTGCCGGTT 
GGCGCCTACA CCTATTCGCA GGGACTGGAA TGGGCGGTTG AATCGGGTGT TATCCGCGAC
GAGGCGAGCG CAGGCCGCTG GATTGCCGAT CTGATGCACC ACGGCATCGG CTGTTACGAA
GCGCCTATGG TTGCCGCGCT AATGACGGCA TGGTCGGCCG GCGATGTCGA CGAGATTGAA
TGCCTCAATG CCGAATTCCT GGCCAGCCGG GAATCGGCCG AACTGCGCGC CGAAACCGTC
CAGATGGGCT TTTCCATGCG CCGCTTGCTG CGCGATTTGC GCGATGACAC GCTGGCCGCA
GTCGCCACAC TGGTCGAAAC CCAAGCAGAA GTGGCCTTTC CCACCGTCTG GTCGGGGATC
GCAGCCGCCT GGCAGATCGA ACCGGAAGCC GCAGTCACCG CCTACCTGTG GTCATGGGCC
GAAAATCAGG TGATGGCCGC ACTGAAAGCT GTACCACTTG GGCAGGCCTC CGGGCAACGC
CTGCTGGCCG AACTTGGCAG CCGGATTCCT GAGGCGGCAG CAAACGCCAA CACCCTGCCG
AAATCCCGGT GGTCCAACTT CACGCCGGCC TTCGCCATCG CCTGCGCCCG CCACGAAACC
CAATATTCAC GTCTCTTCAG ATCGTAA
 
Protein sequence
MKTCLQLARL LQLASPTLPV GAYTYSQGLE WAVESGVIRD EASAGRWIAD LMHHGIGCYE 
APMVAALMTA WSAGDVDEIE CLNAEFLASR ESAELRAETV QMGFSMRRLL RDLRDDTLAA
VATLVETQAE VAFPTVWSGI AAAWQIEPEA AVTAYLWSWA ENQVMAALKA VPLGQASGQR
LLAELGSRIP EAAANANTLP KSRWSNFTPA FAIACARHET QYSRLFRS