| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1350 |
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| Symbol | |
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| ID | 3569240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1466929 |
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| End bp | 1469301 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637679818 |
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| Product | RND efflux transporter |
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| Protein accession | YP_284569 |
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| Protein GI | 71906982 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000000832069 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000222062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATTGAAC GTATTGCCGA ATATTGCATT CGACAGCGCC GGATTGTGGT CGCCGCATTG
GCGCTGCTGA CCGTGGTTTT GGGGTGGTTC GCGCTGCATA TCGAAGTCCG TACGGTGTTC
GAGGACATGC TTCCGTCGCA ACACGAGTAC GTGAAGACTC ACCAGAAGTT CAAGGACACC
TTTGGTGGCT CGAACATGGT GACAATCATG GTTGAGGTCA AAGAGGGGGA TATCTTTCAG
TTGCCTGTCC TGGACAAGGT GCGGACGCTG ACCCTCGGGT TACGCGAAGT CTCCGCCGTT
AATCCGTACC AAATCACCTC TCTCGCATCA AAGAAGTTGA AGGAGGTCCG AGCGTCGACC
GAGGGTATCG AAACCAAGCC CCTAATGTGG CCGAATTTGC CGCAGGGACC GGATGACTTG
GCTGAGTTGA AAGAGAAAGT GCTGCGGAAT CCGCTGGTGT ACGGGCAGTA CGTATCCAAA
GATCTGCAGG CAACGCTGAT TACGGTTGAC TTCATCGACC GTGAGGTCGA CTACGGCAAG
GTGTTTGGTG AAATTCGGGC CCTGGTCGGT AAGGTCGATG ATGGCTCCGT TCGTATTCGC
GTCGTTGGCG ACCCTATCCT CTATGGCTGG GTCAACCACT ACGTGCCGGA AACTGTTGAT
CTGGTGGCGG CTGCGTTGGC TGTCACAATG ATCATGCTAT TTGTCCTTCT TCGCACTTGG
CGTGGCGTAC TTTTGCCTCT CTTGGCTGGT ATGGTCAGCG CAGTCTGGGC ATTGGGCATC
TGCCGTCTGC TCGACATCCA TTTCGAGCCG CTGGTCATCG TTGTCGCCAT GCTTATTACG
TCGCGGGCGG TGTCTCACTC GGTGCAGATC GTCAATCGTT TTGACGATGA GCTCGAAGTC
ATCGAACCCA GTGCTGACTG CGCCCGTGTG GCAGCCAAGA TCGCATTGGC TGACCTTTTC
CGTCCCGGCA TGTTGGGCAT CATTGCCGAT GCCGCGTGCA TGGCAGTGGT GGCTTTGAGC
CCGATTCCGA TGTTGCAGAA GCTGACGGTC CTTTCGGTGG TTTGGGTCTC TACCCTGACG
GTAAGCGCCG TGATTTTGAC CCCCGTACTT CTCTCCTATA TTCGGAAGCC GCATGGCATG
GTCCATGGGA TCAATTTTAT GCCACCGGCC CGAAAGGTAC TTGATTTCGG CGTCTGGTTG
GCAACCTCCA GATTTCGTTA CGTCAACATC GCCTGTAGCG TTGTAGTGAT GGTTATTTCA
GGGATCTATG CTTTCAACCT GAAGATCGGC GATGCCAATC CGGGCTCGCC CATCCTCTGG
CCGGAATCGA CCTACAACGT AGATTCGGCG GCAATCAACA CGCATTTCCA AGGCGTTGAT
CGGATGTTTT TGGTCGTCGG GCAGGATGGC AAGGACGGCT TGCTCAAGAC CAATGAGGTG
TTGCAGTCGA TGAACCGCTT CCAGCGTTTT ATCGAAGCTC AACCGGAGGT CGGTGGATCA
GTCTCGATTG CCGACGTTCT GCCAGTGGTC AATGCGACCC TGCGCGAGGG AAATCCGCGC
TACCTCGAGC TAGGGGCGAC GCAGGCAGTC AATGGCAGCT TGGTGGCAAT TCTCGACTCC
GTTTCTGAAC CCGGCGATAT CGATCGCTTT GCCGACACTA AGTGGGCCAA CGGTGCCATC
ACCATGATGT TCCGCGATCG TCAGGGGGAC ACCATCCAGA CTGCGGTGGC GAGAATCAAG
GAATTTATCG CAGCAAATCC CCTACAGGAA GGCGAGTGGC AATTGGCTGG CGGTTTGATT
GGTGTCATGG CAGCAGTCAA TGAGGTCATC CTTTCCAGCC AGATTGAAGC AATTGCCCTT
GCGTTGTTTG TATTAGTCGT GATTTGCACC ATTGTGTATC GCTCGACCGT CGCCGGCATG
CTGTTTATGG TCCCGGTAAT TATTTCGAAC ACGCTTACCT TCAGCTTCAT GGCGTGGAAG
GGTATCGGTA TGAATATCAA TACCGTACCG GTCGCAGCTC TCGGCATCGG CCTCGGTGTC
GACTACGCAT TTTATATAGC GGATCGCATC AAGGAAGAAA TAGCTGCCGG CAGTACGCCT
GAACACGCGA TTCATGAAGC GCTGCATTCA GCAGGCATGG GCGTCATCGT CACGGCCAGC
GTGCTGATCT GTTCGACGCT GCTGTGGTGG GTCTCATCGT TGAGATTCCA GGCCGAAATG
GGCTTGTTGA TGGCGATCTG GCTCGGCATT TCGGCAGCTA GCGCGCTTTT CGTTATGCCT
GCGCTGATTT ACGTCTTCCG TCCGGCCTTC ATTTTCGAAC CCAAGGGCGA GGCAGTGCTT
GAGCATCTGC GTCCGATTTC AGCCAAAACC TGA
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| Protein sequence | MIERIAEYCI RQRRIVVAAL ALLTVVLGWF ALHIEVRTVF EDMLPSQHEY VKTHQKFKDT
FGGSNMVTIM VEVKEGDIFQ LPVLDKVRTL TLGLREVSAV NPYQITSLAS KKLKEVRAST
EGIETKPLMW PNLPQGPDDL AELKEKVLRN PLVYGQYVSK DLQATLITVD FIDREVDYGK
VFGEIRALVG KVDDGSVRIR VVGDPILYGW VNHYVPETVD LVAAALAVTM IMLFVLLRTW
RGVLLPLLAG MVSAVWALGI CRLLDIHFEP LVIVVAMLIT SRAVSHSVQI VNRFDDELEV
IEPSADCARV AAKIALADLF RPGMLGIIAD AACMAVVALS PIPMLQKLTV LSVVWVSTLT
VSAVILTPVL LSYIRKPHGM VHGINFMPPA RKVLDFGVWL ATSRFRYVNI ACSVVVMVIS
GIYAFNLKIG DANPGSPILW PESTYNVDSA AINTHFQGVD RMFLVVGQDG KDGLLKTNEV
LQSMNRFQRF IEAQPEVGGS VSIADVLPVV NATLREGNPR YLELGATQAV NGSLVAILDS
VSEPGDIDRF ADTKWANGAI TMMFRDRQGD TIQTAVARIK EFIAANPLQE GEWQLAGGLI
GVMAAVNEVI LSSQIEAIAL ALFVLVVICT IVYRSTVAGM LFMVPVIISN TLTFSFMAWK
GIGMNINTVP VAALGIGLGV DYAFYIADRI KEEIAAGSTP EHAIHEALHS AGMGVIVTAS
VLICSTLLWW VSSLRFQAEM GLLMAIWLGI SAASALFVMP ALIYVFRPAF IFEPKGEAVL
EHLRPISAKT
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