Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1327 |
Symbol | |
ID | 3569256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1443950 |
End bp | 1444291 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637679796 |
Product | integration host factor, alpha subunit |
Protein accession | YP_284547 |
Protein GI | 71906960 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 0.125041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0021642 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCTTCA GAAACCATGC AAGCATGACG ATAACCAAAG CAGACCTGGC CGAACACCTC TCCAACGAGA TCGGATTCAA CAACCGTGAA GCCAAGGAAG TGGTTGAGGC CTTTTTTAAG GAATTGTCCG ATTGCCTCGA GCGTGGCGAG GAGATCAAAC TGGCGGGCTT CGGCGTATTT AGCATGCGAA ACAAACCGGA ACGCCCCGGC CGCAATCCGA AGACGGGTGA GGAAATACCC ATCACCGCGC GTCGAGTTGT AACCTTCCAT GCCAGTGGCT GCCTTAAATC AGCTGTCGAG TCGAGTCCCA ACCTTTCACT CAAGGCCGTG AAAGCTGCGT AA
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Protein sequence | MSFRNHASMT ITKADLAEHL SNEIGFNNRE AKEVVEAFFK ELSDCLERGE EIKLAGFGVF SMRNKPERPG RNPKTGEEIP ITARRVVTFH ASGCLKSAVE SSPNLSLKAV KAA
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