Gene Daro_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1327 
Symbol 
ID3569256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1443950 
End bp1444291 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content54% 
IMG OID637679796 
Productintegration host factor, alpha subunit 
Protein accessionYP_284547 
Protein GI71906960 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value0.125041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0021642 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTTCA GAAACCATGC AAGCATGACG ATAACCAAAG CAGACCTGGC CGAACACCTC 
TCCAACGAGA TCGGATTCAA CAACCGTGAA GCCAAGGAAG TGGTTGAGGC CTTTTTTAAG
GAATTGTCCG ATTGCCTCGA GCGTGGCGAG GAGATCAAAC TGGCGGGCTT CGGCGTATTT
AGCATGCGAA ACAAACCGGA ACGCCCCGGC CGCAATCCGA AGACGGGTGA GGAAATACCC
ATCACCGCGC GTCGAGTTGT AACCTTCCAT GCCAGTGGCT GCCTTAAATC AGCTGTCGAG
TCGAGTCCCA ACCTTTCACT CAAGGCCGTG AAAGCTGCGT AA
 
Protein sequence
MSFRNHASMT ITKADLAEHL SNEIGFNNRE AKEVVEAFFK ELSDCLERGE EIKLAGFGVF 
SMRNKPERPG RNPKTGEEIP ITARRVVTFH ASGCLKSAVE SSPNLSLKAV KAA