| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1319 |
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| Symbol | |
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| ID | 3569182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1434246 |
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| End bp | 1436222 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637679781 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal |
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| Protein accession | YP_284539 |
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| Protein GI | 71906952 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
[TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.179908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0765459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGG TCGAAAATCT CCGCCTGGGC TTCACGGCCG GCAAGAAAAC GCTGGCGGCA
GTGGACGGCA TTTCCTTCGC CATTGCCAAA GGCGAGACGT TTGCGCTGCT TGGTGAATCC
GGCTGTGGCA AGTCGGCGAC CGCGCAGGGC ATCATGCGCT TGCTGCCCGC CGCCGGGCGT
ATCCTGAACG GCAGGGTCAC GCTGGATGGC GAGGAGCTGC TGAGCCTGCC AGAGGCCGAT
ATGCGCGCCT ACCGCGGCGG CCGGATGGCG ATGATCTTTC AGGAACCGGC AACCAGCCTG
AATCCTGTGC TCACGGTCGG CCAGCAGATT GGTGAAATGC TGGCCCGGCA TCTTGGCACG
GGCGGCGTGG AAGCGACTGA GCGCATGGTC GATCTGCTGC GTCAGGTCGG GATTGCCGAC
CCCGAGCGCC GCCTGACCGA ATATCCGTTC CAGCTATCCG GTGGCATGAA ACAGCGGGTC
ATGATCGCCA TCGCCCTGGC TGGCGAGCCG GAGTTGTTGA TTGCCGACGA GCCGACCACC
GCGCTTGATG TCACGGTTCA GGCGCAGATT CTCGATTTGC TGGCCAAACT GCAGGCCGAG
CGTGGCATGG GCATGCTGCT GATTACCCAC GATCTCGGCG TCGTCGCGCG GATGGCCCAT
CGCATCGGTG TCATGTACGC CGGCGAGTTG GTCGAAGTGG CCAGCCGTGA GGAATTTTTC
ACCCGGCCGC GCCATCCTTA TACGCAAGCG CTGTTTGAAG CTTTGCCGGA TATTTCCCGG
CGCGACGTAA GCCTGACAAC GATTCCCGGT CAAGTGCCTG CGCTGGCGGC CATGCCGGCT
GGTTGTCGTT TTGCCGACCG TTGTCAGTAC GTCATGCCGG TTTGCCGCGA ACAGTCTCCG
CCGTGGCGTG AATCGGCCGT TGGGCATGTG GTGCGCTGTC ACTGGCAGGG TGAATCGGTA
GCGAGAAATG GGGCTGGGCA CGGCATCACT GAGCAAGATC TCACCCCGGG GCGTGCCTTC
CTGGAAGTGG CCGACCTCAA GGTTTATTTT CCGATCCGCA AGGGTTTTCT GCAGCGGACA
GTGGGCCATG TCCGAGCCGT TGATGGCGTG TCGCTGGCGA TTTCCGCCGG GCGCACGCTG
GCCCTGGTCG GAGAGTCCGG CTGTGGCAAG ACGACGGTGG GCAAGTCGTT GCTGCAGTTG
ATCCAGCCGA CCGCGGGCAG CGTCAGGCTG GGCGATAGCG AACTGGTTGG ACTCCAAGGC
AAGCGCTTGC GTAGCGCCAG GCGCCATCTG CAGATGGTGT TCCAGGACCC ATTTGCCTCG
CTGAATCCAC GCCTGCGGGT CGGCGAGATT ATTGCAGAAG GCATGGGCGC GCTGGGCATC
GAGGCTGAGG CAGCAGCGCA AACAGCGGCC GTTGCAGCGT TGCTGCTGCA GGTTGGCCTG
CCGGGCGACG CAGTGGACCG CTATCCGCAC GAGTTTTCCG GAGGCCAGCG TCAGCGTATC
GCCATTGCCC GGGCGCTGGC GGTGCAACCA GAGTTGCTGA TCTGTGACGA ACCGACCTCG
GCGCTCGATG TTTCGGTGCA GGCGCAGATC CTGAATCTGC TGAAGAAATT GCAAAGTGAG
CTGGGCGTTG CCTATCTGTT CATTACCCAC AACTTTGCGG TTGTCGAATA TCTGGCCCAC
GATGTGGCCG TGATGTATCT GGGGCGTATT GTCGAACGGG GACGTGCGGA GGAGGTTCTG
CGCTCACCGC AGCATCCTTA CACGAAGGCC TTGCTGTCGG CTGTTCCGGT GCCGCGGCTG
GATCGGCCTA CCGTGGCCAT CAAACTGCCT GGAGAAACCC CGTCGCCGGC CAATCCACCG
ACCGGGTGTC ATTTCCATCC ACGTTGTCCT CAGGCAATGG ATGTTTGCCG GCAACGCTAT
CCGCAGGCGA CCGAGATTTC AGCCACCCAC GCTGTCAGCT GTCATCTGCT GGGTTGA
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| Protein sequence | MLKVENLRLG FTAGKKTLAA VDGISFAIAK GETFALLGES GCGKSATAQG IMRLLPAAGR
ILNGRVTLDG EELLSLPEAD MRAYRGGRMA MIFQEPATSL NPVLTVGQQI GEMLARHLGT
GGVEATERMV DLLRQVGIAD PERRLTEYPF QLSGGMKQRV MIAIALAGEP ELLIADEPTT
ALDVTVQAQI LDLLAKLQAE RGMGMLLITH DLGVVARMAH RIGVMYAGEL VEVASREEFF
TRPRHPYTQA LFEALPDISR RDVSLTTIPG QVPALAAMPA GCRFADRCQY VMPVCREQSP
PWRESAVGHV VRCHWQGESV ARNGAGHGIT EQDLTPGRAF LEVADLKVYF PIRKGFLQRT
VGHVRAVDGV SLAISAGRTL ALVGESGCGK TTVGKSLLQL IQPTAGSVRL GDSELVGLQG
KRLRSARRHL QMVFQDPFAS LNPRLRVGEI IAEGMGALGI EAEAAAQTAA VAALLLQVGL
PGDAVDRYPH EFSGGQRQRI AIARALAVQP ELLICDEPTS ALDVSVQAQI LNLLKKLQSE
LGVAYLFITH NFAVVEYLAH DVAVMYLGRI VERGRAEEVL RSPQHPYTKA LLSAVPVPRL
DRPTVAIKLP GETPSPANPP TGCHFHPRCP QAMDVCRQRY PQATEISATH AVSCHLLG
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