Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1283 |
Symbol | |
ID | 3568742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1393343 |
End bp | 1394515 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637679746 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_284505 |
Protein GI | 71906918 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 0.95391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.767339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAGT TTTTCGATTA CTGGCAGTTG TTGCTCATTC CGGTTTTCTT CGGTTTAGGT TGGGCAGCGG CTCGTGTTGA TATGCGCCAG GTGGTGCATG AATCACGCTC ATTGCCGCGT TCGTATTTTC AAGGCTTGAA CTTCCTGCTC AACGAGCAGC CGGATAAGGC CATCGATTCG TTTCTCGAAG TGGCGAAGGT CGATTCACAG ACCGTCGAAC TCCATTTCGC GCTGGGAAAT CTCTTCCGGC GTAGGGGGGA AACCGAACGG GCCATTCGCA TGCACCAGAA CCTGATTGAT TTGCCCGATC TTGAAGAGCG TGTCCGCCTG CAAGCTTTGT CGGAGCTGGG CCAAGATTAT CTGAAGGCTG GATTGCTGGA TCGCGCCGAA GAGATTTTCA ACAAACTTCT TGGGAGCTCC TTCGAGGAGG AGGCCAAGCG CAACCTGCTG GAAATCTACC AGGTCGAGAA GGAGTGGTTG AAGGCGGTCG GGATTGCCCG GGAGTTGCCG GATGTCGCCT CGCATCGCGA GATCGCTGAG TATTACTGCG AACTGGCGGC TAATGAGATT ATGAGATCCC GTCCGGATAC GGCGCGCGAG TATCTTGACG TGGCCATGCA GGAGAATCGG AAGTGTGTCC GCGCCAGCCT GCTGCAGGGG GATTTATTGC TGCAGGAAGG GGCGACGACC GAAGCCATCG AGGCTTGGCA GCGTATCGAG CAGCAGGATC CTGCGTATCT GGCCCTGGTT GCCCAGCGGC TGCTTGAGGC TTATCGCAAG CTGGAGCGGC CGGCCGAAGG TATCGCCTTG CTCAGTGGTT ATCTTGAACG TTATCCCTCG CTTGATCTGC TGGAGGTGGT CTATCAACTT GTGCTGGAGA ACGAGGGGAC GGAAGCGGCC TATCGCCTAG TGCGAGCTGA GTTGCAACGC AATCCGACGC TACTCGGACT GGAAAAACTG ATGAGTGCGC GCCTGCCCTT GGTTGCGCCG GAGGTTCGTC CGGATGTGGA ACTGGCCAAG ACTATCATTC AAGGCTACAC CAAGCGCCTG TCCCGCTATC GGTGCGATAA TTGCGGTTTC AAGGCCCGCC AGTTCTACTG GCGCTGTCCG GCCTGTGGCG GTTGGGAGAC TTATCCGCCG CGCCGTGGCG AAGAATTCGA TCAATCCTTG TAG
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Protein sequence | MNEFFDYWQL LLIPVFFGLG WAAARVDMRQ VVHESRSLPR SYFQGLNFLL NEQPDKAIDS FLEVAKVDSQ TVELHFALGN LFRRRGETER AIRMHQNLID LPDLEERVRL QALSELGQDY LKAGLLDRAE EIFNKLLGSS FEEEAKRNLL EIYQVEKEWL KAVGIARELP DVASHREIAE YYCELAANEI MRSRPDTARE YLDVAMQENR KCVRASLLQG DLLLQEGATT EAIEAWQRIE QQDPAYLALV AQRLLEAYRK LERPAEGIAL LSGYLERYPS LDLLEVVYQL VLENEGTEAA YRLVRAELQR NPTLLGLEKL MSARLPLVAP EVRPDVELAK TIIQGYTKRL SRYRCDNCGF KARQFYWRCP ACGGWETYPP RRGEEFDQSL
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