| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1279 |
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| Symbol | |
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| ID | 3569347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1388994 |
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| End bp | 1390925 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637679742 |
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| Product | bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase |
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| Protein accession | YP_284501 |
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| Protein GI | 71906914 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase
[COG0283] Cytidylate kinase |
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| TIGRFAM ID | [TIGR00017] cytidylate kinase
[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.091835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.851498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTC TCGACCTCCC TCAATTGCTT TCCGCCAGTG GCACGGTTCG TCTGCCTGGC
TCAAAAAGCA TATCCAATCG TGTTCTCCTG TTGGCGGCGC TGTCGGGTGG CGAAACGGAG
GTCCGCGATC TTCTGGGCTC CGACGATACG GAACGCATGC TGGAAGCCTT GAAGGCGTTA
GGTGTTGGCG TTCAGCACCT TGGTGGCGAA AATTGGTCAA TTAAAGGGTG TGGCGGTCAC
TTTCCCGTCA AGCAAATCGA GCTATTCCTT GGTAACGCCG GCACCGCCTT TCGTCCATTG
ACGGCGGCTT TGGCCCTGGC TGGGGGCGAC TATGTCCTCA AGGGCGTTGC GCGGATGCAC
GAGCGGCCAA TTGGCGATCT GGTCGATGGG CTGCGTCAAC TAGGTGCCGA TATCACCTAT
CTTGGTAACG AAGGTTTTCC TCCCTTGCAT CTGAAACCGG CGAGTATTCT GCCGAACGGC
GTGGTCACTG TGCGCGGTGA TGTTTCCAGT CAGTTCCTGA CTGGCTTGCT GATGGCTCTG
CCGCTGACCG GAGAAACGGT TGTCGTTGAA GTGCTTGGTG AGCTGATTTC CAAGCCTTAT
ATTGAAATCA CCCTGGCGAC GATGGCGCGT TTTGGCGTTA TCGTCGAACG TGAAGGTTGG
CAGCGGTTTA CCGTTCTCGC CGGTAGCCGC TATGTTTCGC CGGGGACGAT TTTTGTCGAA
GGCGATGCTT CGTCGGCCTC TTATTTTCTG GCGCTGGGCG CGATTGGTGG TGGTCCTGTG
CGTGTGGAGG GGGTGGGGCG CGACTCGATT CAGGGGGACG TCAAGTTCGC CGAGGCACTG
GTCAAAATGG GTGCTCAAAT TGAGATGGGG CCGAACTGGA TGGAGGCGCG GGCTCCTCAA
GCTGGCTTGG TAGCGGTCGA TCTCGATTGC AACCATATTC CGGATGCGGC GATGACCTTG
GCGACGACCG CGCTCTTCGC CAAAGGAACA ACCACGCTGC GCAATATCGC TAGTTGGCGT
GTCAAGGAAA CCGATCGTAT TGCAGCGATG GCCACGGAGT TGCGCAAGCT GGGGGCGGTA
GTTGATGAGG GGGACGACTA CATTCGCGTC ACACCAGCCG ATTTGAAGCC TGCGGCGATC
GATACCTATG ATGACCATCG GATGGCGATG TGTTTTTCGC TGGCGGCTTT TGGTACGCCC
TTGCGTATCA ACGATCCGAA ATGCGTGGCG AAGACCTTTC CTGATTACTT CGAGCGTTTC
GCCGGGGTGA CCAAGGCTGC GCCAGTGATT GCCATCGATG GTCCTTCGGC TTCCGGGAAG
GGCACAGTGG CTGCGCGTAT CGCATTGGCC TTGGGTTACG ACTATCTGGA TTCGGGGGCG
CTGTACCGGC TGACCGCACT GGCTGCCAAG CAGGCTGGGG TGGATTGGGC TGACGAAGCT
GGTGTGGCGG CAATTGCAGC CGGGCTGGAT GTTGAATTTT CCGAGAGCGA TATTCGTCTG
AACGGCGCGC TGGTTGGTGA TGCCATCCGT ACCGAAGAGA TGTCGGCCGG CGCTTCCAGA
GTTGCCGCCC TGCCTGCTGT GCGCGAGGCT CTGTTGTTCC GGCAGCGGGC CTTTAACAAG
GCCCCCGGCC TGGTTGGCGA CGGGCGTGAC ATGGGCTCCG TAATCTTCCC GCTGGCGGTG
CTCAAGGTCT TCCTCACGGC GACGGCCGAG GCGCGGGCTG AGCGTCGGTA TAAGCAGTTG
ATCGAAAAAG GATTATCTGC TAATCTCGCG GACCTTCTGT TGGACCTCAG GCAGCGTGAC
GAGCGCGATT CGCAGCGCAG CGTTGCTCCA CTCCGGCAAG AGGCAGATGC CAAGCTGCTC
GACACCACGC ATCTCACCAT CGAACAGGCG GTGAATCAGG TGCTGGTCTG GAGCAGGGAA
GCATTGCAGT AA
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| Protein sequence | MEFLDLPQLL SASGTVRLPG SKSISNRVLL LAALSGGETE VRDLLGSDDT ERMLEALKAL
GVGVQHLGGE NWSIKGCGGH FPVKQIELFL GNAGTAFRPL TAALALAGGD YVLKGVARMH
ERPIGDLVDG LRQLGADITY LGNEGFPPLH LKPASILPNG VVTVRGDVSS QFLTGLLMAL
PLTGETVVVE VLGELISKPY IEITLATMAR FGVIVEREGW QRFTVLAGSR YVSPGTIFVE
GDASSASYFL ALGAIGGGPV RVEGVGRDSI QGDVKFAEAL VKMGAQIEMG PNWMEARAPQ
AGLVAVDLDC NHIPDAAMTL ATTALFAKGT TTLRNIASWR VKETDRIAAM ATELRKLGAV
VDEGDDYIRV TPADLKPAAI DTYDDHRMAM CFSLAAFGTP LRINDPKCVA KTFPDYFERF
AGVTKAAPVI AIDGPSASGK GTVAARIALA LGYDYLDSGA LYRLTALAAK QAGVDWADEA
GVAAIAAGLD VEFSESDIRL NGALVGDAIR TEEMSAGASR VAALPAVREA LLFRQRAFNK
APGLVGDGRD MGSVIFPLAV LKVFLTATAE ARAERRYKQL IEKGLSANLA DLLLDLRQRD
ERDSQRSVAP LRQEADAKLL DTTHLTIEQA VNQVLVWSRE ALQ
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