Gene Daro_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1271 
Symbol 
ID3569339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1378912 
End bp1380201 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content51% 
IMG OID637679734 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_284493 
Protein GI71906906 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value0.958308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGGGC ATTTTCGATT GGGACGGAAC GTCGTATTGA CGCTTGCGGG ATTGGCGTTA 
CCCTTGCTGA TGGGCGCCTT TTCGATTCCT TACATTATCG AAAAGCTTGG CACTGGTCGT
TTTGGCGTTC TCACGCTGAT TTGGGCCGTT TTCGGCTATT TCAGTCTGTT TGATTTTGGT
ATCAGTAAAG CCCTGACCAA GCAGGTGGCT GAGGCAAGAG ATGATTCTGA ACGTTCTGGT
GCCGTCGTAC GAGCAGGGCT AACGTTCCTG CTCGGTTTTG GCATATTGCT CAGCGTAATG
TTGTATGCAA GTTTTCCACT GGCAACCGGG GCGGGGGTTT TCAAAGACAC TCCTGAAATT
GAGAGTTGCA TCAATTGGTT GGTTGTGGGA ATGCCGTTTT TGCTTGTATC AAACGGGTTG
CGCGGAATCC TCGAAGGGTT GGGTATCTTC GGGTCTCCCG CTATTGCGCG AATACTATTG
GGTATTTCAA CATTCGGATT GCCACTGCCG CTTCTGGCAT TCTGGCCCTC TCTGGATGTT
CTGGTGATTG GGCTGGTGAT CGGTCGAATC GTTACCGTGG TGACCCAAGC CTGGGCGTGC
GTGCCTTTGC TTCGCCTTGC GCGACATAGC AAATTATCAC CTTCAGAGTT CAAGAGGCTG
CTGACCTTTG GGGGCTGGAT GATGGTGTCT AATCTAGTCA GTCCGCTCAT GGTTTTTGCA
GATCGATTTG TAATTTCAGC GAGCCCATCT GCGTCTAATT TGGCTTACTA CACGACGCCC
TTCGAGGTTG TTACGCGCTT GCTCGTCGTT CCCGCCGCGA TTACGACCGT GCTTTTCCCT
GAAATGGCCA AGTTGCAAGG TGAACGCCAA TTCGAACGTC TGGCCTCCCT CAACCGGCGT
GGCATGCTGG TCATGGCACT CATTATGTTT CCATGTATGG CGATTGGTGT TTTTGGAGCT
AATGCAATTC TGACTTGGTG GCTCGGCGCC CAATTTGCCG ATATGGCGAC AGTGCCAATG
CAGATCATGT GTGTTGGCGT TCTGTTTAAT AGCTTGGCGC AATTTCCGTT CTCATTGATT
CAGGCTGTGG GACGCGTCAA ATTGATTGCC TGCATCCACT GTCTCGAATT GCCATTGTAT
TTTGTGCTGC TTTCGGCCCT GCTCCGGAAC TATGGTATCG ACGGTGCCGC ATGGGCTTGG
TTAATCCGAG TTTTTGTCGA TTTCTCGGTT TTGACCTTCG TTGCCAGGCG TGTTTCAAGT
GGCTCCGGGT TTTCGAAGAT TAACGGTTAG
 
Protein sequence
MVGHFRLGRN VVLTLAGLAL PLLMGAFSIP YIIEKLGTGR FGVLTLIWAV FGYFSLFDFG 
ISKALTKQVA EARDDSERSG AVVRAGLTFL LGFGILLSVM LYASFPLATG AGVFKDTPEI
ESCINWLVVG MPFLLVSNGL RGILEGLGIF GSPAIARILL GISTFGLPLP LLAFWPSLDV
LVIGLVIGRI VTVVTQAWAC VPLLRLARHS KLSPSEFKRL LTFGGWMMVS NLVSPLMVFA
DRFVISASPS ASNLAYYTTP FEVVTRLLVV PAAITTVLFP EMAKLQGERQ FERLASLNRR
GMLVMALIMF PCMAIGVFGA NAILTWWLGA QFADMATVPM QIMCVGVLFN SLAQFPFSLI
QAVGRVKLIA CIHCLELPLY FVLLSALLRN YGIDGAAWAW LIRVFVDFSV LTFVARRVSS
GSGFSKING