| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1257 |
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| Symbol | |
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| ID | 3569364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1364952 |
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| End bp | 1366049 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637679723 |
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| Product | NAD-dependent epimerase/dehydratase:polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_284482 |
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| Protein GI | 71906895 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGT TCGGTGACTT CTACCGCGGG CGCCGGGTCC TGATCACGGG ACATACCGGC
TTCAAGGGAT CCTGGCTCGC ACTATGGCTG CTGCAACTGG GCGCCGAGGT GGCAGGCTTT
TCGATTGACG TGCCTTCCAA TCCTTCCAAT TTTGAACTGC TGGGCTTGAA GGAGCGCTTG
CGCCACTACA GCGGCGACGT CTGCCAGCTT GGCCAGCTCG AGCAGGCGAT CGATGAATTC
CAGCCGGAGA TCATTTTTCA CCTAGCTGCC CAGGCCTTGG TGCGGCGCTC TTACCAGGAT
CCGCGCGGCA CTATCGAGAC CAACGTGATG GGCATGGTCA ACGTCCTGGA ACTGGTCCGT
AGCCGACCTT TCATCAGGAC AGCCGTCCTG ATCACGAGCG ACAAGGCCTA TCGAAACGAC
GAATGGTGCT GGGGCTATCG CGAAACGGAC GCCCTCGGCG GACATGATCC CTACAGCGGC
TCCAAGAGCT GCGCCGACCT AGTGGCGCAA ACTTACATCC ACTCCTATCT GCGCAGTTCC
GGCAAGCGGG TGGCAATTAC TCGCGCCGGC AACGTGATCG GCGGCGGCGA CTGGGCCAGC
GATCGCATCG TGCCCGACTG CATCCGCGCC TGGACCGAGG GCGGTTCAGT AGAAGTGCGC
AGTCCATCCG CCACCCGCCC CTGGCAACAT GTGCTCGAGC CTCTGGGAGC CTACCTCTGG
CTCGGAGCCT CGCTGCAGCG TGACGAGCGC ATCAATGGCG AGGCCTTCAA TTTCGGTCCG
GCGGCTCACG TCAACCAGAG CGTAGGGGAG TTGCTTGACG CCATGGCCCA GCGCTGGCCA
GGCGCCCAAT GGAACTCGCC TGCCAATGCG GGCCGGCCCG CTCAAACCGA AGCCACGCTG
CTGAAGCTCT CCTGCGACAA GGCGCAGGCC TACCTGGACT GGCGCGCGGT ACTCGATTTC
AGCGACACGG TGGAGCTCAC CGTCGACTGG TATCGAAACT GGTACGAAGG GAAGCAGGAC
ATTTTCGCCT ATGCGCTGCG CCAGGTTGAG GCCTACTGCG ACCTGGCCAA AGTCAGGGGA
GCGAAATGGC TGACGTGA
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| Protein sequence | MKQFGDFYRG RRVLITGHTG FKGSWLALWL LQLGAEVAGF SIDVPSNPSN FELLGLKERL
RHYSGDVCQL GQLEQAIDEF QPEIIFHLAA QALVRRSYQD PRGTIETNVM GMVNVLELVR
SRPFIRTAVL ITSDKAYRND EWCWGYRETD ALGGHDPYSG SKSCADLVAQ TYIHSYLRSS
GKRVAITRAG NVIGGGDWAS DRIVPDCIRA WTEGGSVEVR SPSATRPWQH VLEPLGAYLW
LGASLQRDER INGEAFNFGP AAHVNQSVGE LLDAMAQRWP GAQWNSPANA GRPAQTEATL
LKLSCDKAQA YLDWRAVLDF SDTVELTVDW YRNWYEGKQD IFAYALRQVE AYCDLAKVRG
AKWLT
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