| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1254 |
|---|
| Symbol | |
|---|
| ID | 3569361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1361979 |
|---|
| End bp | 1363175 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637679720 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_284479 |
|---|
| Protein GI | 71906892 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 0.163689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCGGC TCCTTGTATT CACCGAGAAC TATGCGCGCG GTGGCGGCAA TCGCTACATG
ATCGACCTCC TCAATGGCCT GCATAGGGAC TTTGACGAAG TGCTGATGGC CGCCAACGCC
GGCGGCGTCT TTGCCGAAGA CTTGGCCCGC GCCTCCTCGA GCGTAAAGGT GTTGCGGGCC
TCATTCCTGA CGCGCTCTCT GGTAGCACAC AAGATCGGGG CCTGGCCCCG GACACTGCAA
AAGCTGTTGT TGGCAGCCCT ACTGCCGGCC GAGCCCTTGC TGTTCCTGTT CAACATCCTC
TCGTTGCGTG CGCTGCTGGC GCGTGTACGG CCGGTCATGG TCATGGTTTG CAACGGTGGC
TATCCGGCGT CGCAAGCTTG TCTGGCCATG CTGGTTGCGG CCCGCATGGC GAGGCTGCAT
GCGGCGATGA GCATCGTCAG CACTCCGTCC CCGCGCCGTC GTTCGGTCGC GGCTTGGGAT
GCCCTGCTCG ATCGCCTCTC CTGGCGCAAC GCAGGCCGCA TTATTGTCAA CGCCGAGGCG
ATTTCGCGGG CATTGCAAAC ACTGCGCGGC ATGCCGCCTG GGCGCGCCGA TGTGCTGCAC
AATGGACTGG AAGATGCGCC TCCCGCCGCC CCGGCACGCC GGGTGGGCCG CTTGCAGGTG
GGCTGCGTCG CCAGGCTTGA CCGCCTGAAG GGCGTACTGG ATCTTTTGGA AGCCTATTCC
AGCCTCGCCG GCACTTTCCC CCAGCTTGAC CTGGTGCTGG CAGGTGAGGG GGACGTCTCC
CAACAGATGC GGCAACGCAC GCGCGAACTG GGATTGCAGG ACCGCATTCA TTTCCTTGGC
CACTATACGG GAGACATTGC CACATTGCTG GCAAGCTTCG ATATCTACGC CTTTCCCTCC
CTGTGGGAAG GCTTCCCCTA TAGCCTCCTG GAGGCAATGC GCGCTGGCTG CCCAATCGTG
GCCACCCGCG TGGGGGGCAT ACCCGAAGCG ATCCGCGACC GCAGCAACGG CTTGCTGGTT
GCACCGGGCG AGCCACAAGC CCTGGCTGCG GCCATTGCTG AACTGGCCCG AGATGCCGAG
CTGCGCCAAG CCTTGGGCGA GAATGCACGA CTTGCCTTTG ATCGACATTT TTCCCTGAGC
CGCATGCACG CCCGCACCCG CGGCCTGCTG CAGCCGGAGC TGGCGCATGA AGCTTGA
|
|---|
| Protein sequence | MRRLLVFTEN YARGGGNRYM IDLLNGLHRD FDEVLMAANA GGVFAEDLAR ASSSVKVLRA
SFLTRSLVAH KIGAWPRTLQ KLLLAALLPA EPLLFLFNIL SLRALLARVR PVMVMVCNGG
YPASQACLAM LVAARMARLH AAMSIVSTPS PRRRSVAAWD ALLDRLSWRN AGRIIVNAEA
ISRALQTLRG MPPGRADVLH NGLEDAPPAA PARRVGRLQV GCVARLDRLK GVLDLLEAYS
SLAGTFPQLD LVLAGEGDVS QQMRQRTREL GLQDRIHFLG HYTGDIATLL ASFDIYAFPS
LWEGFPYSLL EAMRAGCPIV ATRVGGIPEA IRDRSNGLLV APGEPQALAA AIAELARDAE
LRQALGENAR LAFDRHFSLS RMHARTRGLL QPELAHEA
|
|---|
| |