Gene Daro_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1200 
Symbol 
ID3570141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1304018 
End bp1305031 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content57% 
IMG OID637679667 
Productextracellular solute-binding protein 
Protein accessionYP_284426 
Protein GI71906839 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTA GACCAGTCCT GATCGCCGCC GTTATCACTT TGGCCCAATC AGCCACGGCC 
GAAGACAAGA TTCTGAATCT TTACTCCGCC CGCCACTACC AGACGGACGA AGCACTTTAC
GCCAACTTCA CGCAGCAAAC AGGCATCAGG ATCAACCGCA TTGAAGGCAA GGAAGATGAA
TTGCTTGAGC GGATCAGGAA CGAAGGATTG AACAGCCCGG CTGATGTATT CCTGACCGTT
GATGCCGCCC GCCTGGCCAA GGCACATGAA CTTGGCCTGT TCGCTCCGCT GGCCTCAAAA
CTTCTCGAAA CCAGGATTCC GGCCCACCTG CGTACCGAAG ACTGGTTCTC GTTTTCAACC
CGCGCCCGCG TCATCGTATA CAACAAGGCC TCAGTCAAAC GGGAAGACGT GCAGAACTAC
GCCGACCTGG CGAATCCTAA GCTGAAGGGC AAGCTCTGCT CCCGTTCGGG CTCCCATCCC
TACAATTTGT CGCTGATGGC ATCGATCATC GCCCACCAAG GTGAGAGCAA GGCCGAAGAA
CTGGCCCGCG GCATGGTCGC CAACTTTGCC CGCGCCCCCA AAGGTGGCGA TACGGACCAG
ATCAAGTCGG TGGCTGTCGG CGAGTGTGGG GTAACGATTT CCAATACCTA CTACGTGGCC
CGATTGCTCC GTTCGACCAA ACCCGAAGAG ATCAAGCTGA TGGAAAAAGT CGGCGTCATC
TGGCCGGAGC AGAGCGGCAA CGGCGCTCAC ATCAACGTCT CCGGCGGCGG CATGCTCAGG
ACGGCGCCAC ACAAGGAAGC CGCCGTCAAA TTCCTGGAAT ACCTGGCCTC CGATCAGGCA
CAACGCTATT TCGCCGATGG CAACAACGAA TGGCCGGCCG TCGATAGCGT CAAGGTAGCC
AATCCGGCCC TGGAGTCACT CGGCAAATTC AAGGCTGACC AGTTGCCGGT CAAAAACCTG
GCCATGTACC AGAGCAAGGC GCAGATCATT TTCGACCGCG TCGGATTCAA ATAA
 
Protein sequence
MKLRPVLIAA VITLAQSATA EDKILNLYSA RHYQTDEALY ANFTQQTGIR INRIEGKEDE 
LLERIRNEGL NSPADVFLTV DAARLAKAHE LGLFAPLASK LLETRIPAHL RTEDWFSFST
RARVIVYNKA SVKREDVQNY ADLANPKLKG KLCSRSGSHP YNLSLMASII AHQGESKAEE
LARGMVANFA RAPKGGDTDQ IKSVAVGECG VTISNTYYVA RLLRSTKPEE IKLMEKVGVI
WPEQSGNGAH INVSGGGMLR TAPHKEAAVK FLEYLASDQA QRYFADGNNE WPAVDSVKVA
NPALESLGKF KADQLPVKNL AMYQSKAQII FDRVGFK