| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1184 |
|---|
| Symbol | |
|---|
| ID | 3570125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 1290279 |
|---|
| End bp | 1292144 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637679651 |
|---|
| Product | K+ potassium transporter |
|---|
| Protein accession | YP_284410 |
|---|
| Protein GI | 71906823 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3158] K+ transporter |
|---|
| TIGRFAM ID | [TIGR00794] potassium uptake protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCAC ATTCCAAGCA AGCCTTGCCG GCCATTACGG TTGCAGCCAT CGGCGTCGTC
TTCGGCGACA TCGGAACCAG CCCGCTCTAT GCCCTGAAGG AAATCTTCAA CGGCCATCAT
CCGATCCCGG TCACGCCGGA AAATATTCTC GGTGTTCTGT CGCTGGTTTT CTGGGCAATC
ATCGTGCTGG TCACGATCAA GTACGTCGCC ATCATCATGC GCGCCGACAA CCGCGGCGAA
GGTGGCTCTC TGGCACTGCT CGCGCTGGTC ACCGAACGCG CCAAGAATCC CCGCCTGTCC
TGGATCATCA CCCTGCTCGG CATTTTCGCA GCGGCGCTGT TCTACGGTGA CAGCATGATC
ACCCCAGCCA TTTCGGTGCT TTCCGCGGTC GAGGGACTGG AAATCATCAC CCCCGACCTC
AAGTCTTACG TCATCCCGAT CACGCTCGGC ATCCTGACCG GACTGTTCTT CATCCAGAAG
CACGGAACCG GCGCAGTCGG CAAGCTGTTC GGCCCGGTCA TGGTGGCGTG GTTCGGCATT
CTGGCCATTC TGGGTCTGAA GGAAATTGCC TATAACCCGG CCGTTCTGCT CGCCCTCAAT
CCACTGTTTG CCATCGTTTT CGTGGCCGAA CACACCGGTC TCGCCTTTCT GGCACTCGGT
TCAGTCGTGC TTGCCGTAAC CGGCGGCGAG GCACTCTATA CCGACATGGG CCACTTCGGG
CGCTTCCCGA TTCGCCTCGC CTGGTTCGGT TTCGTCATGC CGGCGCTGGT CCTCAATTAT
TTCGGCCAGG GCGCCCTGCT GCTGATCGAA CCGGAAGCCA TCGCCAGCCC CTTCTTCCAC
CTCGCTCCCG ACTGGGCCCT GATCCCGATG GTCGGCCTGG CCACCGCCGC CACCGTCATT
GCCTCGCAGG CAGTGATTTC CGGCGCCTTC TCGGTCGCCC GCCAGTCGAT CCAGATGGGC
CTGCTGCCGC GCATGCAGAT CATCCACACC TCAGGCATGG AAGAAGGCCA GATCTACGTG
CCCTTCACCA ACTGGTCGCT CTACCTGGCC GTCATCGCCC TGGTCATCGG CTTCAAGAAT
TCCTCCAACC TCGCCGCCGC CTACGGCATC GCCGTCACCG GCACCATGTT GATCGACACC
ATTCTGGTCG CTTTCGTCAT GGTTCTGATG TGGAAATGGA ACAAGTTGCT CGTGGCGCTC
GTTGCCGGCA CGCTGCTGCT GGTCGACATC GCCTTCTTTG CCGCCAACGC GATCAAGATC
CCGGAGGGCG GCTGGTTCCC GCTGGCCATG GGCCTTGTTT CCTTCACCGT GCTGACCACC
TGGCGGCGCG GTCGGCGCAT GGTTTCGGAA GAAATGGCCA AGCAAAGCAT TCCGATGTCC
GACTTCCTGC AATCGATCGA CGACGTCCAC CGCATCTACG GCACGGCCAT CTTCATGACC
AGCGCCAAGG ACGGCGTGCC ACCAGCCCTG CTGCACAACC TCAAACACAA TCAGGTGCTG
CATGAACGGG TCGTGCTGGT CACCGTGCAG ACGACCGACA CGCCCACCGT CAATGATATG
GAGCGCATCT ACCTCCATCG CATGCAGAAA GGTTTCATGC GCCTGATCGT TCGCTACGGC
TTCATGGAAA GTCCGGATAT TCCCGGCGCA CTGGAACTGT GCAAGGGTCA CGGCGAGCGT
TTCGACATGA TGGAAACGAC CTTCTACCTA TCCCGTGAAA CCATCGTTCC ATCAATGGCA
CGTGGCATGC TCCCCTGGCG CGCCCGCCTG TTTGCCGTCA TGTCGAAAAA CGCCACCAGC
GCCAGCGACT TCTTCCATAT CCCGACCAAC CGCGTGGTCG AACTGGGGAC TCAACTGGTC
ATCTGA
|
|---|
| Protein sequence | MSSHSKQALP AITVAAIGVV FGDIGTSPLY ALKEIFNGHH PIPVTPENIL GVLSLVFWAI
IVLVTIKYVA IIMRADNRGE GGSLALLALV TERAKNPRLS WIITLLGIFA AALFYGDSMI
TPAISVLSAV EGLEIITPDL KSYVIPITLG ILTGLFFIQK HGTGAVGKLF GPVMVAWFGI
LAILGLKEIA YNPAVLLALN PLFAIVFVAE HTGLAFLALG SVVLAVTGGE ALYTDMGHFG
RFPIRLAWFG FVMPALVLNY FGQGALLLIE PEAIASPFFH LAPDWALIPM VGLATAATVI
ASQAVISGAF SVARQSIQMG LLPRMQIIHT SGMEEGQIYV PFTNWSLYLA VIALVIGFKN
SSNLAAAYGI AVTGTMLIDT ILVAFVMVLM WKWNKLLVAL VAGTLLLVDI AFFAANAIKI
PEGGWFPLAM GLVSFTVLTT WRRGRRMVSE EMAKQSIPMS DFLQSIDDVH RIYGTAIFMT
SAKDGVPPAL LHNLKHNQVL HERVVLVTVQ TTDTPTVNDM ERIYLHRMQK GFMRLIVRYG
FMESPDIPGA LELCKGHGER FDMMETTFYL SRETIVPSMA RGMLPWRARL FAVMSKNATS
ASDFFHIPTN RVVELGTQLV I
|
|---|
| |