Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1118 |
Symbol | |
ID | 3570013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1220106 |
End bp | 1221926 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637679580 |
Product | helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal |
Protein accession | YP_284344 |
Protein GI | 71906757 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 0.892999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.51461 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACAC CTGTCGAAAG CTTTGCCGAT CTCGGTTTAA GCGAAACGCT TCTGCAAACT CTCACCCAAA TCGGCTACGA AACCCCGTCG CCCATTCAGG CTCAATGTAT CCCTGTTCTG CTCGAAGGTC ATGACCTGAT CGGCATGGCC CAGACCGGCA CCGGCAAGAC CGCCGCCTTT GCGCTGCCGC TGATGGAACA GATCGACGTC AAGCTGACCA AGCCGCAGGC GCTGATCCTG ACGCCGACGC GCGAACTGGC CATCCAGGTC GCCGAAGCCC TGCAGACCTA CGCCAAGAAC CTGCCCGGCT TCCACGTGCT GCCGATCTAC GGTGGCCAGA GCTACACCAT CCAGCTCAAG CAGTTGTCGC GCGGCGCTCA CGTCATCGTC GGCACCCCGG GTCGCGTCAT GGACCACCTC GAGCGCAAGA CGCTCAACCT CGACCACCTG AAGACCATGG TGCTCGACGA AGCCGACGAA ATGCTGCGCA TGGGCTTCAT TGACGACGTC GAGTGGATTC TCGAACGTAC GCCAGCCCAG CACCAGACCG CGCTGTTCTC GGCCACCATG CCGGAACAGA TTCGCCGCGT CGCCCAGAAA TATCTGGTCG AGCCGCGCGA AATCAAGATC AAGTCAGCTA CCGCTACCGT CGCTGCCATC CGTCAGGTTT ACTGGCAGGT TTCCGGCATG CACAAGCTGG ATGCCCTGAC CCGCATCCTC GAAGTTGAAG AAGACTTCGA CGCGGCCATC ATCTTCGTGC GCACCAAGAC GGCCACCGTC GAGCTGGCCG ACAAGCTGTC AGCCCGTGGT TACGCCGCCG CCGCGCTGAA CGGCGACCTC AACCAGCAGA TGCGCGAACG CGTCATCGAG CAGTTGAAGT CGGGCGCCCT GGACATCGTC ATTGCGACCG ACGTTGCCGC CCGCGGTATC GACGTACCGC GCGTCAGCCA CGTCGTTAAC TACGATATTC CATACGACAC CGAAGCCTAC GTGCACCGGA TCGGCCGTAC CGGCCGCGCT GGCCGCACCG GCAACGCCAT CCTGTTCGTC GCGCCGCGCG AAATCCGCAT GCTGCGTACA ATCGAGCGCG CCACCCGTTC GCCGATCGCC CCGCTGACCC TGCCGAGCCG CGCCGATGTG ACCAACAAGC GCGTTGCCGA CTTCAAGAGC AAGGTTGTTG AAGTGCTCAA CGCCGAAGGC CTGGATTTCT TCTCGAACAT CGTCTCGCAA ATTGCCGAAG AGCAAAATGT CGGCGCCGAG GAAGTGGCTG CTGCGCTGGC CATGATGGCT CAAGAAGGCA AGCCGCTGCA GATCGCCGGT GAAGATCCGC GTCCGGCACC GGCGCCCCGC CCGGGCAGCT TTGGCGAAAG CGATCGCAAG CCGCGTTTTG AAGATCGTGG CGATCGTCCA CGCTTCGAAG ATCGCGGGGA ACGGCCGCGT CGCGAAGACC GCCCGGCTCG CCAGGCTCCG GCCGGCGACA TGGTGCGCTA CCGCATTGAC GTGGGTCGTG ACCACGGCGT CGAAGTACGC GACATCGTCG GCGCCATCGC CAACGAAGCC GGCATCGAAA GCCGTTTCAT CGGCCGCATC GGTCTCTACG AAGACTCCAG TACCGTTGAA CTGCCTGCAG GCATGCCGGC CGAAGCCTCC AACGCCCTGA AGCGCACCCG CATTCGCGGC GTGCCGATCA ACCTGCGTCC GGATGAAGGT CGTCCGGGTG CCGGCGGCGC GGGTGGCGGC GAACGCAAGT TCGGCGGCGG TGATCGCAAG CCTGAAGGTG ATCGCGGCGG CTTCAAGAAG AAGAAGTTCG GCGACCGCTA A
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Protein sequence | MSTPVESFAD LGLSETLLQT LTQIGYETPS PIQAQCIPVL LEGHDLIGMA QTGTGKTAAF ALPLMEQIDV KLTKPQALIL TPTRELAIQV AEALQTYAKN LPGFHVLPIY GGQSYTIQLK QLSRGAHVIV GTPGRVMDHL ERKTLNLDHL KTMVLDEADE MLRMGFIDDV EWILERTPAQ HQTALFSATM PEQIRRVAQK YLVEPREIKI KSATATVAAI RQVYWQVSGM HKLDALTRIL EVEEDFDAAI IFVRTKTATV ELADKLSARG YAAAALNGDL NQQMRERVIE QLKSGALDIV IATDVAARGI DVPRVSHVVN YDIPYDTEAY VHRIGRTGRA GRTGNAILFV APREIRMLRT IERATRSPIA PLTLPSRADV TNKRVADFKS KVVEVLNAEG LDFFSNIVSQ IAEEQNVGAE EVAAALAMMA QEGKPLQIAG EDPRPAPAPR PGSFGESDRK PRFEDRGDRP RFEDRGERPR REDRPARQAP AGDMVRYRID VGRDHGVEVR DIVGAIANEA GIESRFIGRI GLYEDSSTVE LPAGMPAEAS NALKRTRIRG VPINLRPDEG RPGAGGAGGG ERKFGGGDRK PEGDRGGFKK KKFGDR
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