Gene Daro_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1115 
Symbol 
ID3570010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1217756 
End bp1218499 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID637679577 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_284341 
Protein GI71906754 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value0.955363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.19888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAA CAGCACAAAA TGCCTTCGGC TTTGCCCACC TTTGGGCCAG CGGTGACCTG 
ATCTCCCATG CCATTGCCTG CATTCTTGCC GTCATGTCGA TCGCCAGCTG GTATCTGATT
CTGGCCAAAG CCTGGGACTG GTTCCGGGCC CGCCGCGCCG CCAAGGCCAT GGCCGCTTTC
TGGGCCGCCA GCAGTGTCAG CGAAGGCATC GAACAACTGC GCAAGGCAGG TGAAGACAGC
CCGTACGCCC AGTTGGCCAC CCAGGCGAAT TGCTGCAACC ATGACTGCGA AGCGGTTACC
GGCCGCCTGG CTTCCCGTTT CGACCCAGCC GAGCAGATGG AACGCGCCCT GCGCCAGCAA
CTTTCCGCCA CCCAGGCCCG GATGGAAAAC GGCCTGACCC TGCTCGCGAC CACCGGTGCG
ACATCACCGT TCGTCGGTCT GTTCGGCACC GTCTGGGGCA TTTATCACGC CTTGGTCGCC
ATCGGCATTT CCGGCCAGGC CGCGCTGGAA AAAATCGCCG GCCCGGTCGG CGAAGCGCTG
ATCATGACCG CTGCCGGCCT CGCCGTTGCG TTGCCTGCCG TCTTTGCCTA CAACGCCTTC
ACCCGCGCCA ACCGTGTCCT ATTGGCGGAT CTCGACGCCT TCGCCCACGA TCTGCACGCC
TTCTTCACGG TCGGCAAGCC ATTTGTCGCC AACAGTGCGC AGATTCACCC GATGCGCGCC
CGCGCCGCCA CGGAGGCTGC ATAA
 
Protein sequence
MQETAQNAFG FAHLWASGDL ISHAIACILA VMSIASWYLI LAKAWDWFRA RRAAKAMAAF 
WAASSVSEGI EQLRKAGEDS PYAQLATQAN CCNHDCEAVT GRLASRFDPA EQMERALRQQ
LSATQARMEN GLTLLATTGA TSPFVGLFGT VWGIYHALVA IGISGQAALE KIAGPVGEAL
IMTAAGLAVA LPAVFAYNAF TRANRVLLAD LDAFAHDLHA FFTVGKPFVA NSAQIHPMRA
RAATEAA