Gene Daro_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1114 
Symbol 
ID3570009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1217329 
End bp1217754 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content60% 
IMG OID637679576 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_284340 
Protein GI71906753 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value0.809728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.285485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTG GTAGCTTCAG TTCGCAAAAT CACCAGATGC CGACCGCCGA AATCAACATG 
ACGCCGCTGG TGGACGTGAT GTTGGTACTA CTGATCATCT TCATGATCAC CGCACCGCTG
ATGACGCATT CGGTCAAGGT CGAACTGCCG CGTGCCTCCA GCACGCCGAC GCCGGAAAAG
CCGATGACGC TGCAGGTCTC GATCAATGCC GAAAACACGG TTTTTGTCGG CACGCAGGCG
GTCGACCGCA ACAGCCTCGA AGCCAGGTTC GGCGAAGCGG TGGCCCAGGA TGCCAATGTC
GAAATGCACT TGAAAGCCGA CCGCGCCACC CGGTACGAAG CCGTCGCCGA AACGATGAGT
GCCGCCCGCC GCGCCGGGCT GACCAAGATC GGCTTCGTCA CGCAACCGGG AAGCGACAAG
CCTTAA
 
Protein sequence
MAIGSFSSQN HQMPTAEINM TPLVDVMLVL LIIFMITAPL MTHSVKVELP RASSTPTPEK 
PMTLQVSINA ENTVFVGTQA VDRNSLEARF GEAVAQDANV EMHLKADRAT RYEAVAETMS
AARRAGLTKI GFVTQPGSDK P