Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1096 |
Symbol | |
ID | 3569369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1198750 |
End bp | 1199949 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637679558 |
Product | major facilitator transporter |
Protein accession | YP_284322 |
Protein GI | 71906735 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.454099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGAAG CTCCGGAAGC CCAACACCGC CGCGCTGTCA TGCTGCTCTC CGTCGCCGCC TTCGCCAGCG CGGCGGCAGC GCGGCTGTGC GACCCGATGC TGCCCGACCT CGCTCGCAGC TTCACGGCCA GCCCGACTGC CGTCGCCTCG GTCATCTCCT CGTTCGCCAT CGCCTATGGC CTGACCCAGG CCATGTTCGG CCCGCTCGGC GACCGCCTCG GCAAATACCG CCTGATCGCC CTGACCACCC TGCTCAGCAC GCTGGGCGCA CTCGGCTCGG CCATCGCCTG GTCGCTCGAT GCGCTGGTCG TCTCCCGCGT GCTGCTCGGC GCCACGGCGG CCGGCATCAT CCCGCTCTCC ATGGCGTGGA TCGGCGACAC GGTGCCCTAC GAACAACGGC AAGCCACGCT CGCCCGCTTC CTGGGCGGGC AGATTCTCGG CGCCATCGGC GGCCAGTTCA TTGGTGGCGT GTTCACCGAC ACGCTCGGCT GGCGCTGGGC CTTCGCCTTC CTGGCCGGGC TCTACCTGAT CATCGGCGCC GTCGTCCTGC TCGAATCGCG GGCCAACCCG AGCACCCATC ACCGCCATGC CGATACCCCC CGCCAGGGCA TTCTCGGCCA GGCCGCGCAG GTCTTCGCCC AACCGTGGGC CCGGGTCATC CTGAGCATTG TTTTCCTCGA AGGCATGCTG GTGTTCGGTG CCCTGGCCTT CGTGCCCTCC TACCTGCACG AACATTTCGG CCTCAGCCTC ACCATGGCCG GCGCCGCCAT GGCCTTCTTC GGCCTCGGCG GCCTGTCGTA CATCCTTGCC GCCCGGCATT TTGTCCGCCT CCTCGGCGAA GTCGGGCTGG CCACCGGCGG CGGCATTCTC ATCGCGCTCG GCTGGGCGAT GCTGGCCTGG GGCACCACCT GGCTATGGGC CCTGCCGGCC AGCTATTTTG TCGGCCTCGG CTTCTACATG CTGCACAACA CCCTGCAGAC CAACGCCACC CAGATGGCCC CCGCCGTACG CGGCACCGCG GTCTCCTTGT TCGCCTCCAG TTTCTTCCTC GGCCAATCGC TCGGCGTCAC CCTCGCTGCC CACATCCTGG CCGCATCCGG CATCCTCCCC ATGCTGCTGA TCGCTGCCAT CGGCACACCG CTGGTTGGTG GTACGCTGGC CTGGCTTCTC TCCCGGCACC ACCGCATACA TTCCGCCTAG
|
Protein sequence | MPEAPEAQHR RAVMLLSVAA FASAAAARLC DPMLPDLARS FTASPTAVAS VISSFAIAYG LTQAMFGPLG DRLGKYRLIA LTTLLSTLGA LGSAIAWSLD ALVVSRVLLG ATAAGIIPLS MAWIGDTVPY EQRQATLARF LGGQILGAIG GQFIGGVFTD TLGWRWAFAF LAGLYLIIGA VVLLESRANP STHHRHADTP RQGILGQAAQ VFAQPWARVI LSIVFLEGML VFGALAFVPS YLHEHFGLSL TMAGAAMAFF GLGGLSYILA ARHFVRLLGE VGLATGGGIL IALGWAMLAW GTTWLWALPA SYFVGLGFYM LHNTLQTNAT QMAPAVRGTA VSLFASSFFL GQSLGVTLAA HILAASGILP MLLIAAIGTP LVGGTLAWLL SRHHRIHSA
|
| |