| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1055 |
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| Symbol | |
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| ID | 3568121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1157324 |
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| End bp | 1159486 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637679517 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_284281 |
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| Protein GI | 71906694 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAA GAATCTTGCC GGGGCAAAAG ACCCGGATTG CCTGCCCTGC CGTTTTCGCC
AAACGCTCGA TGGCGCGCCG CAGTAGGTTT TTGCCGCTGG GGGCGGCCGT CGTTGCAGGT
TTGCTGGGCG CTGCGGATGG GGCGTTTGCC GAAGAAGACA AGACCTTGTC TGCGGTAACG
GTGACGGCAA CCCAGGATGG GCCGGATGGC TACCGCGCCA CGAAGACCCG CGTCGGCAAG
GTGGTGCAGG ATCCGCATGA CGTCCCTCAG GCCATCACCA CGGTGACCCG GGCGCTGATC
GAGGAGCAGG AAGCCAACTC CCTGCGCGAA GCACTGCGCA ACGTTTCCGG TCTCAGCTTC
AACGCTGCCG AGGGCGGTCG TTCTGGCGAC AACATGAATC TGCGCGGTTT TTATACCTTT
GGCGACATGT ATCTCGACGG TATTCGCGAT ACGGCCCAGT ACAACCGCGA ACTGTTCAAC
CTCGAGCAGG TCGATGTGTT GCGCGGTGCA GCGGCCATGC TGTTCGGGCG CGGCCAGGCA
GGGGGCGTGA TCAATCAGGT CAGCAAGACG CCGATGCTGT ACGGCATCAA CAAGGTCGGC
ATCGGTATCG GCACCGATGG CTTCCAGGAG GTGAAGGCCG ACCTGAACCA GCGGGTCGGC
GATACCACGG CCTTCCGTAT CAACGTGATG AATCGCGATG AAGGCAGTGC GCGCAGCAAT
CCCTATACCG GCACTGAACC GGAAATCCAT CGCATGGGCT TCGCACCGAG CGTTTCGTTC
GGACTGGGGA CCAACCACGA AGTCACGCTG AGCCATTTGT GGGTCAAAAC GCAGGATCGC
GCCGATTACG GCGTTCCTTT CGTGAATCGC AAGCCCAACG AGGATATGGC GAAAGCCGGA
AACTATTACG GCGTCGATGC CAACTTCGAC GACAGTGAGA CGAATATCTC CACCTTGAAT
TACCTGTTCA AGATTTCGCC GGATACCCAG TGGCGAACTG TGATGCGGGC GGCCAACTAC
AAGCGTTCCT ACTGGGCGGT GGCCGGGCAG GGCGTCCTGA CCGCGAACAG CACGGCGGGA
CAAGCCAAAA CCCGTGAGTT CGAGACCGAT AATTACGTGT TGCAGAGCGA TCTGAACACG
GCCTTTACGC TGTTCGGCCT GAAGAACGAA CTGATCACCG GTGTCGAATA CCTCAACGAG
GATTCGATCC GCTGGGCGCT GCGCAATCTG GGTACGGCCA ACAACCCACT GTACAAGCCG
GGTCAATATA CGACGGCGGC GCCGGCTACC TACAAGGGCG AAACCTACAG CGCCTACGTG
CAGGATAGCC TCGAGTTCAT TCCGGACTGG AAGATGACGC TCGGCATCCG CCGCGACATC
ATGCAGTCCG AATACTTCAC GACGACGGCC TTTAGCGGCA ATTTTGCCGA GAACAGCTAC
CGGGCTGGCC TGTCCTGGCA ACCGACCGCG GCGCAGCACT ACTACGCCGG GTGGAGCGAT
TCGTTCAGCC CGACGGCCGA TCTTTATCAG TTGTCCGGTA ACCAGTATCC GGCCGAGCGA
TCGAAGGTGT TCGAGCTGGG CAGCAAGTGG CTGCTGGCCG ATGGCAACCT CTCCCTGCGC
ACTTCGCTCT ACCGCGCCAT CAAGGATTGG GAACGCAATA CCGACCTCGA ATCGACGGCG
ACCATCCTGA CCCGCAAGCG GCAGTCGGAC GGTGTCGAAC TCGAAGTGGC CGGCCGGATT
ACCGACAACT GGGAAGTGTT CAGCGGCCTG TCGCTGATAC ATGCAGAGAT TCTTGAAGTG
GCGCCGGGCA ACGGCAATGT GAATTTCATC GGCCAGATGC CGCGCAATAC GCCGAAGAAG
ACCTTCAACC TGTGGTCGAC CTACCAGTTG CCCTATGGCT TCAAAGTTGG TGGCGGCATG
GAGTACAAGA GCCAGCGTTA CGGCGGGGCG CCGACCGGTA CGGCGGTTTT CAACCCGAAC
TGGGTGCCGT CCTATACCCG CTGGGATGCG ATGGTCTCCT ACGACCAGCC CAAGTACACG
GTCAAGTTCA ACGTCCAGAA CATTTTCGAC AAGCTGTATT ACGACGCCCT GTATGACAAC
GGCGGTTTTA CCGTGCCCGG CCAGGCACGC CGTTTCATCC TGAGCACCGA GTACAAATTC
TGA
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| Protein sequence | MKKRILPGQK TRIACPAVFA KRSMARRSRF LPLGAAVVAG LLGAADGAFA EEDKTLSAVT
VTATQDGPDG YRATKTRVGK VVQDPHDVPQ AITTVTRALI EEQEANSLRE ALRNVSGLSF
NAAEGGRSGD NMNLRGFYTF GDMYLDGIRD TAQYNRELFN LEQVDVLRGA AAMLFGRGQA
GGVINQVSKT PMLYGINKVG IGIGTDGFQE VKADLNQRVG DTTAFRINVM NRDEGSARSN
PYTGTEPEIH RMGFAPSVSF GLGTNHEVTL SHLWVKTQDR ADYGVPFVNR KPNEDMAKAG
NYYGVDANFD DSETNISTLN YLFKISPDTQ WRTVMRAANY KRSYWAVAGQ GVLTANSTAG
QAKTREFETD NYVLQSDLNT AFTLFGLKNE LITGVEYLNE DSIRWALRNL GTANNPLYKP
GQYTTAAPAT YKGETYSAYV QDSLEFIPDW KMTLGIRRDI MQSEYFTTTA FSGNFAENSY
RAGLSWQPTA AQHYYAGWSD SFSPTADLYQ LSGNQYPAER SKVFELGSKW LLADGNLSLR
TSLYRAIKDW ERNTDLESTA TILTRKRQSD GVELEVAGRI TDNWEVFSGL SLIHAEILEV
APGNGNVNFI GQMPRNTPKK TFNLWSTYQL PYGFKVGGGM EYKSQRYGGA PTGTAVFNPN
WVPSYTRWDA MVSYDQPKYT VKFNVQNIFD KLYYDALYDN GGFTVPGQAR RFILSTEYKF
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