Gene Daro_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1043 
Symbol 
ID3568206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1142987 
End bp1143949 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content55% 
IMG OID637679505 
Productcation efflux protein 
Protein accessionYP_284269 
Protein GI71906682 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAGTG GCCATCTTTT TATGTTCAAG CTTCTGGGAT CAGTCGTGAT CAATACTTCA 
AGCGCGCCGC CAGCATTGCA ACGCTATGCT TGGCTATCCA TTGCCGCCGC GATTTCCACC
ATTCTTCTCA AGGGGGTGGC CTGGAAACTG ACCGGTTCGG TCGGTCTGCT GTCCGATGCG
ATTGAGTCAT TCGTTAATCT GGCTGGCGCA CTGATGGCCT TGTGGATGCT CACCGTCGCT
GCTTTGCCTG CCGATGATGA GCATACGCAC GGACACAGCA AGGCAGAGTA TTTTTCCAGC
GCCTTCGAGG GGTTTTTGAT CGTGTTGGCT GCGGGAAGCA TTGCTTACAC GGCGATTGAT
CGATTCATCC ATCCTCAGCC GCTTGAAACA GTCGGCGTTG GCTTGCTGGT CTCGGTCCTG
GCTTCAGTGA TCAATTTCCT GACGGCGCGA ACCTTGATGG CGGTCGGAAA AAAACACAAT
TCAATTACGC TCGAAGCGGA TGCGCACCAC CTGATGACCG ACGTCTGGAC TTCGGTTGGG
GTCATTGCCG GAGTCGGCTT GGTCGCTGTC ACCGGCTGGA TCTGGCTGGA CCCGGCCATA
GCGCTGCTGG TGGCGATCAA TATCATCTGG ACAGGCTGGC ACCTGATGCA TCGTTCTGCC
TCTGGAATGA TGGACTCCTC GTTGCCGTCT GACGACCTGA AGAAAATCGA AGGCGTGTTG
GCCTCGTTTG AGTCGCAAGG CATCGCCTTT CATGCCTTGC GTACCCGGCA GGCTGGTAGT
CGCGCTTTCA TCAGTGTCCA TCTGCTGATG CCTGGGCACT GGAGCATACA AATTGGCCAT
GACTGGTCGG AAAAAATTGA AGCCGAGATT CGCCGGGAAC TAGCCAATGC GCACATCACT
ACCCATATCG AGCCGCTCGA AGATCCGGTT TCAATGACCG ATCAGGAGCT GGATCGGCCA
TAA
 
Protein sequence
MGSGHLFMFK LLGSVVINTS SAPPALQRYA WLSIAAAIST ILLKGVAWKL TGSVGLLSDA 
IESFVNLAGA LMALWMLTVA ALPADDEHTH GHSKAEYFSS AFEGFLIVLA AGSIAYTAID
RFIHPQPLET VGVGLLVSVL ASVINFLTAR TLMAVGKKHN SITLEADAHH LMTDVWTSVG
VIAGVGLVAV TGWIWLDPAI ALLVAINIIW TGWHLMHRSA SGMMDSSLPS DDLKKIEGVL
ASFESQGIAF HALRTRQAGS RAFISVHLLM PGHWSIQIGH DWSEKIEAEI RRELANAHIT
THIEPLEDPV SMTDQELDRP