| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1023 |
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| Symbol | |
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| ID | 3568104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1122926 |
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| End bp | 1124707 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637679482 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_284249 |
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| Protein GI | 71906662 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGTC ATACCCCCAA GCGGAGTGCC CTCACACTTG CGCTGATCGC CGCCGCCGTT
CTGGCCGGCG GGCAGGCTCT GGCCGGCGTC ACCGATGCCG ACATCCTGAA CGATGCCAAG
ACCACCGGCG ACGTCGTCAG CTTTGGCCTC GGCACGCAGG GCCAACGCTT CAGCCCGTCT
ACGCAGATCA ACACCAAATC CGTGAAGAAC CTGGTCCCGG CCTGGTCGAT GTCCTTCGGC
GGCGAGAAGC AGCGCGGCCA GGAATCGCAG CCGGTCATCC ACGACGGCAA GATGTTCGTC
ACCGCCTCCT ACAGCCGCCT GTTCGCCATC GATGCGAAGA CCGGCAAGAA GCTGTGGAAG
TACGAGCACC GTCTGCCGGA CGGCATCATG CCCTGCTGTG ACGTGATCAA TCGCGGCGCC
GCGCTGTACG GCGACCTGGT CATCTTCGCC ACGCTGGATG CCCAACTCGT GGCCATGAAC
CAGAATACCG GCAAGGTCGT CTGGAAGGAA AAGCTCGGCG ATTACGCGGC CGGCTATTCC
GCCTCCGCCG CCCCGATCAT TGCCAAGGGC AAGCTGATCA CGGGCATCTC CGGTGGCGAA
TTCGGCGCTG TCGGCCGCAT TGACGCCCGC GACCCGCTGA CCGGCAAGCT GCTGTGGACC
CGTCCGACCG TCGAAGGCCA CATGGGCTAT CGCTACGACG CCGACGGCAA GGCTATCGAA
AACGGCATCT CCGGCACCCT CAACGCCACC TGGAGCGGCG ACCTCTGGCA AACTGGCGGC
GCAGCAACCT GGAACGGCGC CACCTACGAT CCGGAAACCA ACCTGATCTT CGCCGGCACC
GGCAATCCGG CCCCGTGGAA CAGCCACCTG CGCCCGGGCG ACAACCTGTT CTCGTCGTCC
ACCGTTGCCA TCGATGCCGA CACCGGCAAG ATCGCCTGGC ACTTCCAGGG CACCCCGCAC
GACGGCTGGG ACTTTGACGG CGTTAACGAG TTCGTCTCCT TTGACCTCAA GGACCCGAAG
ACCGGCAAGA TCGTCAAGGC AGGTGCAAAG GCTGACCGCA ACGGCTTCTT CTTCGTGAAC
GACCGCACCA ACGGCAAGCT GCTCGGCGCC TACCCGTTCG TCAAGAAGAT CACCTGGGCT
ACCGGCTTCA ACCTCGAAAC CGGCCGTCCG AACTACATCG AAGAAGGCCG TCCGGGCGAC
CCGAACGCCA GTGCCGATGG CAAGAAGGGC AAGGTCGTCT TCTCGGCTCC GTCCTTCCTC
GGCGGCAAGA ACCAGCAACA AATGGCCTAC AGCCCGCAAA CCGGCCTCTT CTACGTGCCG
GCCAACGAGT GGTCGATGGA TATCTGGAAC GAACCCGTTT CCTACAAGAA AGGTGCGGCT
TACCTCGGCG CCGGCTTCAC CATCAAGGCT CTGAACGACG ACTACATCGG CGCCCTGCGC
GCGGTCGACC CGGCTACCGG CAAGATCGTC TGGGAAAACA AGAACTACGC TCCGCTGTGG
GGCGGCGTCC TGACCACCGC CGGCGGCCTC GTCTTCTACG GCACCCCCGA AGGCTTCCTG
AAGGGTGTCG ATGCCAAGAC CGGCAAGGAA CTGTGGTCCT TCAACGTCGG CACCGGCATC
GTTGCACCAC CGGTCAGTTG GGAGCAGGAT GGCGAGCAGA TGATCGCCGT CACGACCGGC
TGGGGCGGCG CCGTGCCGCT GTGGGGCGGC GACGTCGCCA AGCGCGTGAA CTTCCTCGAA
CAGGGCGGTT CCGTCTGGGT CTTCAAGCTG CACAAGGGCT AA
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| Protein sequence | MHSHTPKRSA LTLALIAAAV LAGGQALAGV TDADILNDAK TTGDVVSFGL GTQGQRFSPS
TQINTKSVKN LVPAWSMSFG GEKQRGQESQ PVIHDGKMFV TASYSRLFAI DAKTGKKLWK
YEHRLPDGIM PCCDVINRGA ALYGDLVIFA TLDAQLVAMN QNTGKVVWKE KLGDYAAGYS
ASAAPIIAKG KLITGISGGE FGAVGRIDAR DPLTGKLLWT RPTVEGHMGY RYDADGKAIE
NGISGTLNAT WSGDLWQTGG AATWNGATYD PETNLIFAGT GNPAPWNSHL RPGDNLFSSS
TVAIDADTGK IAWHFQGTPH DGWDFDGVNE FVSFDLKDPK TGKIVKAGAK ADRNGFFFVN
DRTNGKLLGA YPFVKKITWA TGFNLETGRP NYIEEGRPGD PNASADGKKG KVVFSAPSFL
GGKNQQQMAY SPQTGLFYVP ANEWSMDIWN EPVSYKKGAA YLGAGFTIKA LNDDYIGALR
AVDPATGKIV WENKNYAPLW GGVLTTAGGL VFYGTPEGFL KGVDAKTGKE LWSFNVGTGI
VAPPVSWEQD GEQMIAVTTG WGGAVPLWGG DVAKRVNFLE QGGSVWVFKL HKG
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