Gene Daro_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0992 
Symbol 
ID3569317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1085593 
End bp1087005 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content61% 
IMG OID637679451 
ProductBeta-lactamase-like:RNA-metabolising metallo-beta-lactamase 
Protein accessionYP_284218 
Protein GI71906631 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTCG GATTTCTTGG TGCGGCCGGC GAAGTGACCG GTTCCTGCAC GCTCGTTGAA 
ACGGGTGACA TCCGTTTTCT GGTCGATTGC GGCATGTTCC AGGGTGGCCC CGAAGCCCGC
CAAAAGAACC AGCGTGCGCT CAATTTTGGC TTCGATGTCC GCGAGATCGA TTTTGTCTTG
CTGACCCATG CCCATATCGA TCATTCCGGT CTGCTGCCGC GGCTTTCGAT GCTCGGTTAT
CGCGGACCCA TCTACGCCAC GCCGGCGACC ATCGACCTGC TTGAAGTGTT GCTGCCGGAC
AGCGCGCATA TCCAGGAAAA GGAATCGGAA TGGCAGTTGC GCAATCGCCA TCGACGCGGC
AAGGGTGAGC GCGGCATTGC GCCGCCCTTG TATACCGTGG AACAGGCGCT GGCGTCGTTG
AAGCTGCTGC AGCCGGTCAG CTATGGAGAA AGCCTGCAGC CGGCCGAGTC GGTCAGTGTG
CGTTTTCACG ATGCCGGGCA TATTCTTGGC TCGGCCTGGC TGGAGGTGAT GGTCAGCAAC
GAAGGAAAGC CGCGTCGGCT GGTCTTTTCC GGTGATCTCG GCATGTCTGA CCGGCCTGTG
TTGTACGACC CGGAGGCGCC GCCGGCCGAA GCCGATGTGG TACTGATCGA ATCCACTTAC
GGCGACCGTT TGCACCGTTC GCTGGCGGAG ACCGAGGATG AAATCGTCGC TGCCTTCGAG
CGGACCAAGG CGGCCAAGGG CAATCTGATC ATTCCCTCCT TTGCCGTCGG GCGAACGCAG
GAAATTCTTT ACATGCTGAC CGGTCTGGTC AGGCGCAAGC GGCTATCTCC GCTGAAGGTG
TATGTCGATT CGCCGATGGC CAATTCGGCG ACGCGGATTA CCCTCTCTCA CCCAAATCTG
CTCGATCCCG AAACCCGCGA GTTGATTGTC TGGCAGCAAT CGCATCCAGA CAAGATGTAC
ATTGAAGCCG TGGCCGATGT CGAGCGCTCC AAGTCCCTGA ATGAGATTCG CAGTGGTGCG
GTCATTCTGT CAGCCAGCGG CATGTGCGAG GCCGGGCGGA TCAAGTATCA CCTGCGTGAA
AATCTGCCAC GCAGCGAGTG CAGCGTGCTG ATCGCCGGTT TCCAGGCGGC AGGAACGCTT
GGGCGGCGCC TGGTCGACGG GGCACGGCTG GTCCATATCT TCGGCCAGCC GGTGCCGGTC
AGGGCGCGCA TTTACACGGT CGGTGGTTTG TCTGCCCATG CCGATCAGGC TGCCTTGCTC
AAATGGCTGG GTGGCTTCCA CAAGCAGCCG GGAAGAACCT TCGTCGTCCA TGGCGAGGCG
GGTGCATCTG CCAACTTTGC CCAGGCGATC GGCGAGCAAC TCGGCTGGTC TGATGTGCAT
CTGCCATCCC CCGGTGAATT CGTCACGCTG TAA
 
Protein sequence
MRLGFLGAAG EVTGSCTLVE TGDIRFLVDC GMFQGGPEAR QKNQRALNFG FDVREIDFVL 
LTHAHIDHSG LLPRLSMLGY RGPIYATPAT IDLLEVLLPD SAHIQEKESE WQLRNRHRRG
KGERGIAPPL YTVEQALASL KLLQPVSYGE SLQPAESVSV RFHDAGHILG SAWLEVMVSN
EGKPRRLVFS GDLGMSDRPV LYDPEAPPAE ADVVLIESTY GDRLHRSLAE TEDEIVAAFE
RTKAAKGNLI IPSFAVGRTQ EILYMLTGLV RRKRLSPLKV YVDSPMANSA TRITLSHPNL
LDPETRELIV WQQSHPDKMY IEAVADVERS KSLNEIRSGA VILSASGMCE AGRIKYHLRE
NLPRSECSVL IAGFQAAGTL GRRLVDGARL VHIFGQPVPV RARIYTVGGL SAHADQAALL
KWLGGFHKQP GRTFVVHGEA GASANFAQAI GEQLGWSDVH LPSPGEFVTL