| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0947 |
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| Symbol | tpiA |
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| ID | 3570261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1028125 |
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| End bp | 1028874 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637679405 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_284173 |
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| Protein GI | 71906586 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 0.144972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTAAAA AGCTCGTTGC AGGTAACTGG AAAATGCATG GCAGCCTCCA GCAGAACGCA
GCGCTGCTTG AACTTATCAA GGCTGGGGTC TCGAGTTTGC CTTGTGAAGT CGCTGTCTGT
CCGCCGTATC CATATCTTGG GCAGGTACAG TCAATTCTTT CCGGGTCTGC GCTGGCTTGG
GGGGCTCAGT CTGTAAGCGA GCATCAGTCT GGTGCTTTTA CTGGCGAAGT TGCTGCTTCC
ATGTTACTGG AGTTTGGATG CCGATATGTG CTGGTGGGGC ATTCTGAACG TCGTGCGCTG
TATGGTGAAA CGGATACGGT CGTTTCGGCT AAGTTTGAGG CGGTGCAGAG GGCTGGCTTG
GTTCCGGTTT TGTGTGTCGG TGAGACCCTG GCTGAGCGCG AATCTGGTAT GACAAGTGTT
GTCGTGGCTC GTCAGTTGTC GGCAGTTCTG GGTCGTGTTG GAGTCGCAGC CATGGCTTCT
GCGGTGGTTG CCTATGAACC AGTTTGGGCA ATCGGAACCG GTGTGACAGC CTCGCCTGCT
CAGGCGCAGG AGGTTCATGC GGCGATTCGT GCCAAGGTTG CGGAATTGGA TCTTGGGGTG
GCAAATGGTT TGCGTATTTT GTATGGTGGT AGCGTCAAGC CACAAAATGC GATGGAGTTG
TTTGGGCAGG ATGATATCGA TGGTGGTTTG ATCGGTGGTG CTGCCTTGGT TGCGGATGAT
TTTCTGGCGA TTTGCCGCGC GGCAAATTGA
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| Protein sequence | MRKKLVAGNW KMHGSLQQNA ALLELIKAGV SSLPCEVAVC PPYPYLGQVQ SILSGSALAW
GAQSVSEHQS GAFTGEVAAS MLLEFGCRYV LVGHSERRAL YGETDTVVSA KFEAVQRAGL
VPVLCVGETL AERESGMTSV VVARQLSAVL GRVGVAAMAS AVVAYEPVWA IGTGVTASPA
QAQEVHAAIR AKVAELDLGV ANGLRILYGG SVKPQNAMEL FGQDDIDGGL IGGAALVADD
FLAICRAAN
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