| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0916 |
|---|
| Symbol | |
|---|
| ID | 3570073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 991621 |
|---|
| End bp | 992193 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637679374 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
|---|
| Protein accession | YP_284142 |
|---|
| Protein GI | 71906555 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 0.904188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAA AAATTTCTGT TCTCGCCGCT GGCCTGCTGG CTTCAGCAAT GGTGTGGGCT
GCCCCAACCG TCGAAATGAC GACCAATCTG GGCAAGTTCA CGCTTGAACT GTTCCCGGAA
AAGGCCCCGA AAACGGTTGA AATGTTTCTC TATAACGCCA AGCACGGTTT TTATGAGGCG
ACCATCTTCC ACCGCGTGAT TGATGGCTTC ATGATCCAGG GTGGCGGTTT CAGCCGGGCC
ATGGAAGAGA AAAAGACCCT GACCCCGGCG CTGCAGAACG AAGCCACCAA CGGCCTGACC
AATGACCGTG GCACGGTGGC CATGGCACGC ACGCAGGACC CGCATTCAGC TCGCGTCCAG
TTCTTCATCA ATCTGAAGGA CAACGAGTTC CTGAACCATC GCAACTCTAC CGACCCACGC
GGCTGGGGCT ATGCCGTCTT TGGCAAAGTG ACCCAGGGCA TGGATGTCGT CGACAAGATT
GCCAAGGTGC CGACCGGCAA CGCTGGCTAT TACGAAAACG TTCCGACGAC ACCGGTTGTC
ATTCAGAACG TCAAAATCAT CTCTGAAAAA TAA
|
|---|
| Protein sequence | MLKKISVLAA GLLASAMVWA APTVEMTTNL GKFTLELFPE KAPKTVEMFL YNAKHGFYEA
TIFHRVIDGF MIQGGGFSRA MEEKKTLTPA LQNEATNGLT NDRGTVAMAR TQDPHSARVQ
FFINLKDNEF LNHRNSTDPR GWGYAVFGKV TQGMDVVDKI AKVPTGNAGY YENVPTTPVV
IQNVKIISEK
|
|---|
| |