| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0877 |
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| Symbol | |
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| ID | 3569940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 949480 |
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| End bp | 950661 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637679335 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_284103 |
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| Protein GI | 71906516 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0710283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACT TGCCGAATTA CCGTCCGGAA ACGCTGGCAG TTCGTGCCGG CCAGGAGCGC
AGCCAGTTTG GCGAACATTC CGAAGCGCTC TACCTGACCT CAAGTTTTGT TTTCAAGAGC
GCGGCACAGG CGGCAAAGCG TTTCTCCGGT GAAGAGGAGG GCAACGTTTA CGCCCGCTTC
TCCAACCCGA CCGTCACCAT GTTCGAGGAG CGCCTTGCTG CCCTGGAGGG CGCCGAGGAT
TGCGTCGCCA CCTCAAGTGG CATGTCGGCG ATCATGGCCG CCGTGCTGGC CCATCTGAAG
CAGGGTGATC ACATTGTTGC CTCGAATAGC CTGTTCGGCG CGACGGTGCA ATTGTTCAAC
AATATCCTGT CGCGGACCGG CATCACGACC ACCTTCGTGT CGCATACCGA TCCAGCGGCC
TGGGCAGCGG CGATCCGTCC GGAAACGAAG TTGTTTTTCC TGGAAACGCC GTCCAATCCG
CTGACCGAAA TCGCCGACAT TCGGGCGCTG GTCGCCATTG CCCACGCCAA GGGCATTCTG
GTCGCCGTCG ACAACTGTTT CTGTACGCCT ATCCTGCAAC GCCCACTCGA TATGGGGGCT
GATCTGGTCA TTCATTCGGC CACCAAGTTC CTGGACGGCC AGGGGCGCGT CCTGGGTGGT
GCCGTTTGTG GCCCGAAAAA ACTGACCGAA GAAGTCTTCA AATACCTGCG TACAGCCGGT
CCGACCTTGT CGGCCTTCAA TGCCTGGGTG TTGCTCAAGG GCCTCGAAAC CCTGAAGTTG
CGGGTTGAGG CACAGTCCGC CAATGCCGCA GGGCTGGCTG CCTGGCTGGA AGCGCACCCG
AAGGTGGCCC GCGTTTTCTA TCCCGGCCTG CCATCGCATC CTCAGCACGA GTTGGCCAAG
ACCCAGCAAA AATCCGGTGG TGCCATTGTC GCCTTCGAGG TGAAGGGCGC TCGCGAACAA
GCCTGGCAGG TCGTCGATAA TTGCCGCCTG CTGTCCATTA CCGCCAATCT CGGCGATACC
AAGACCACCA TCACCCATCC TGCCTCCACC ACGCATGGCC GCATTTCCCC GGAAGCCCGG
GCCGCTGCCG GCATCAATGA AGGGCTGCTG CGCATCGCCG TCGGCCTTGA AGCGGTAGAG
GACCTGCAGG CCGACCTCGA ACGGGGTCTG GCTCCTATCT GA
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| Protein sequence | MADLPNYRPE TLAVRAGQER SQFGEHSEAL YLTSSFVFKS AAQAAKRFSG EEEGNVYARF
SNPTVTMFEE RLAALEGAED CVATSSGMSA IMAAVLAHLK QGDHIVASNS LFGATVQLFN
NILSRTGITT TFVSHTDPAA WAAAIRPETK LFFLETPSNP LTEIADIRAL VAIAHAKGIL
VAVDNCFCTP ILQRPLDMGA DLVIHSATKF LDGQGRVLGG AVCGPKKLTE EVFKYLRTAG
PTLSAFNAWV LLKGLETLKL RVEAQSANAA GLAAWLEAHP KVARVFYPGL PSHPQHELAK
TQQKSGGAIV AFEVKGAREQ AWQVVDNCRL LSITANLGDT KTTITHPAST THGRISPEAR
AAAGINEGLL RIAVGLEAVE DLQADLERGL API
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