Gene Daro_0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0854 
Symbol 
ID3569841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp927513 
End bp927971 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content57% 
IMG OID637679312 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_284080 
Protein GI71906493 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00000000272063 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000781259 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCCATGT TGATTACCCG CCGCCTCGAA TTCGATGCCG GGCACCGCAT CCCCGACCAC 
AAAAGCCAGT GCCGCCATCT GCACGGGCAT CGCTACGCCA TTGAAATCAC CCTCTCCGGT
AGCGTGATCG ACAAGGCCGG AGATGCCGCA AACGGCATGG TGATGGATTT TTCGCAAGTC
AAGGACCTGG CCAACCTCCA TCTGGTCAAG GAATGGGACC ACGCCTTTCT TGCCTTTGCA
GGTGACAAGG CCATTGTCGA TTTCCTGTCG TCGCTGCCTG GACACAAGAC AGTCATCCTC
GATCGTGTGC CAACCGCCGA AAATCTGGCC CGACTTGCCT TCGAGCGACT CGATGCGGTT
TACCGGGACA CCTACGGCAA CCACCTGCAA CTGGAACAGG TAAGACTCTA CGAAACGCCC
AACTGCTGGG CCGATGCTTT ACGCACCAAG CTGGATTGA
 
Protein sequence
MPMLITRRLE FDAGHRIPDH KSQCRHLHGH RYAIEITLSG SVIDKAGDAA NGMVMDFSQV 
KDLANLHLVK EWDHAFLAFA GDKAIVDFLS SLPGHKTVIL DRVPTAENLA RLAFERLDAV
YRDTYGNHLQ LEQVRLYETP NCWADALRTK LD