Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0848 |
Symbol | |
ID | 3569664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 921688 |
End bp | 922455 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637679305 |
Product | Beta-lactamase-like |
Protein accession | YP_284074 |
Protein GI | 71906487 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 0.701692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00132369 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATCCGTT TTGCCTCGCT CGGCAGTGGC AGCGCAGGCA ATGCGCTGCT GGTCGAGCAT GGGGCAACCT GCCTGATGCT CGATTGCGGC TTCGGGTTGC GGGAAACCGT AACCAGGCTG CAGCGTCTGG GCCGGCAACC GGCCGATCTG GCCGGTATTC TTGTTACCCA TGAACATGGC GACCATGTCG GCGGAGTTTT CCGGCTAGCC CGTAAATTCG GGCTCCCGAT ATGGATGACG CATGGGACCT GGGGTGCCTG TCGGGACGAT GGTGATGGCA TCGATCTGCG CATTATCGAT AGTCATCGTT CCTTTACTGT CGGTGACCTC GAGATCTTGC CGTTTCCTGT GCCGCATGAT GCGCGGGAAC CCGTTCAGTA TGTGTTTTCG GGGGCGGGAC GTCGTCTGGG TGTGTTGACC GATATTGGCG AAACGACCCC GCATGTCTGC GAAGTATTAT CCGGCTGCGC TGGCTTGGTT CTTGAGTTCA ACCATGATGC CGAGATGCTT GAGCGCTCAA CCTATCCGAT TTCGCTCAAA CGGCGAATCT CCGGGCGCTA TGGTCATTTG GAAAATTCCG CAGCCGCTGC ACTTCTTAAT TTGATTGACT GCTCAAACCT TCAACATCTG GTGGCGGCCC ATTTGAGCGA GCGTAATAAC CTGCCAGAGC TGGTGGTGCG CCTGATTAGC GAGACGCTGG CTTGCCCGCC TGAGCAGGTG GGGGTGGCGA CGCCGGAAGA CGGATTTGAT TGGCGCAGCT TGGTGTAG
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Protein sequence | MIRFASLGSG SAGNALLVEH GATCLMLDCG FGLRETVTRL QRLGRQPADL AGILVTHEHG DHVGGVFRLA RKFGLPIWMT HGTWGACRDD GDGIDLRIID SHRSFTVGDL EILPFPVPHD AREPVQYVFS GAGRRLGVLT DIGETTPHVC EVLSGCAGLV LEFNHDAEML ERSTYPISLK RRISGRYGHL ENSAAAALLN LIDCSNLQHL VAAHLSERNN LPELVVRLIS ETLACPPEQV GVATPEDGFD WRSLV
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