| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0842 |
|---|
| Symbol | |
|---|
| ID | 3569658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 915722 |
|---|
| End bp | 916891 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637679299 |
|---|
| Product | signal transduction protein |
|---|
| Protein accession | YP_284068 |
|---|
| Protein GI | 71906481 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 65 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0117523 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATT CGGACCCCGT TTTTGTCCAG CCACTGCTCG GCACTGATGA CGCATGGTCG
GGCTATCAGG CCGAGTTGGC GCCCGGCGCG AATGACAAAA TCCTCGCCCG GCTTTGCGCT
TCGCCACAGC TAGACGAATT CGATCAGCGG CTACCATGGC TCCTTCCGGC ATCCAGCAAG
TGCACTGAGT TGGCGCGCCT GGGCGAACGC TCGGTCAGCG TTTTCCCGGC ACAAACCGCC
CTCGAGAACG AAGATGCCCT CAAGCAACTG GAAGCCGAGC GACGCCGAGG CAAATGCAAG
GTCGGACTGA TGGCATCGGC AAATGCCAAA TTGCCGGCAA CCGGAACCTG GGATTATTTG
TTGATCGGTG CCAGCCACGC TCGCTGCTTG CCGCCCTTCA CGCTACACGG CATGGCCAGT
CGCACCACGG TCGTCGCGAC CGATGTGCAT TCTCACAGTG ATCGCGAGTG GTTGTTGGGC
AACGCCTGTG CGCTGTCCAC CAGCGAATTC CTGCTGACTC GTTCGGCCAG CAACAGCAAG
GCCGACATCA CCCGACTCAA GCTGCTCAAA TTGCTGACCC TGATTGAAGG GGATGCCGAT
ACCGGCGCCC TTGAAACTGT TTTTCGCGAG GAAGCAAAGC TGTCGTACAG CCTGCTCCGA
TTGGTCAATT CGGCGGCATT GGCCCCGCGC AGCCCGATTA CCAGCTTCAC CCAGGCGATC
AACCTGCTTG GTCGCCGCCA GTTGCAGCGT TGGCTGCAGT TGCTGGTCTA TTCCGACCCG
AATAACGGGC AGCACCCGAC CCCATTGCTC CAGAAGGCAG CCTCGCGCGG CCGTATTCTC
GAACTATTGC TTGGCCAACT CGACCCGACA CTCGAAAACC CGGAAGACAC GGCCTTCATG
ATCGGCACCT TCTCGCTGCT CGACGTCTTG CTCAACATGT CCATGTCGGA CATCGTCCAT
CAACTGCCGC TGCCACCTGT CGTCCACGAA GCGCTGGCAG CACGTGACGG ACCGCTAGGC
CAACTGCTCG GCGTGCTCGA CGCTGCTGAC AAGCACGAAT TGTCGCTGGC TGCCACGCTG
CTCGAAAAAC TTGGCATTGG TGCCGACACC TATCTTGATG CTCAGCTCAA TGCGTACAGT
TGGGCGGCAA AAATCCGGCC GGCGGCCTGA
|
|---|
| Protein sequence | MNHSDPVFVQ PLLGTDDAWS GYQAELAPGA NDKILARLCA SPQLDEFDQR LPWLLPASSK
CTELARLGER SVSVFPAQTA LENEDALKQL EAERRRGKCK VGLMASANAK LPATGTWDYL
LIGASHARCL PPFTLHGMAS RTTVVATDVH SHSDREWLLG NACALSTSEF LLTRSASNSK
ADITRLKLLK LLTLIEGDAD TGALETVFRE EAKLSYSLLR LVNSAALAPR SPITSFTQAI
NLLGRRQLQR WLQLLVYSDP NNGQHPTPLL QKAASRGRIL ELLLGQLDPT LENPEDTAFM
IGTFSLLDVL LNMSMSDIVH QLPLPPVVHE ALAARDGPLG QLLGVLDAAD KHELSLAATL
LEKLGIGADT YLDAQLNAYS WAAKIRPAA
|
|---|
| |