| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0838 |
|---|
| Symbol | |
|---|
| ID | 3569654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 910742 |
|---|
| End bp | 912682 |
|---|
| Gene Length | 1941 bp |
|---|
| Protein Length | 646 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637679295 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_284064 |
|---|
| Protein GI | 71906477 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0257096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTATT TCAAACTGAC TGACGCCTGC CTTGCCTACG GCCACGTGCC GCTCCTTGAT
CACGCCGATT TTTTGCTCGA TCCCGGCGAA CGGGTGGCCC TGATCGGCCG CAACGGCACT
GGAAAATCAT CGCTCCTGGC CGCGATGGCG GCGGGCAGCG GGCGGGGGCG GCTGGACGAT
GGCGAAGTCT GGGTGCAGCC CGGTATTCGT GTCGGCTATG TGTCGCAGGA GCCACCTTTC
GATGCCGAAT CGACGGTCTT TGAGGCGGTC ATTTCCGGCA TGGGCGAGAA CGCGACCCTG
TTGGCGGAGT ACCACGAGGT GTCGCACAAG CTGAGCGAAG TCGATGCGGA CCACGAAGTA
CTGCTCGAAC GGATGTCAGC ACTGCAGCAC GAACTGGAAT CGCGTGGTGC GTGGGCCTAC
GAGGCGCAGG CCGAGCGCGT CATCGAGCGT TTCGGGCTGG ACCCGGATGC CAGGGTCGGC
AGCCTGTCCG GCGGCCAGAA GAAGCGTCTG GCGCTGGCTC AGGCCCTGGC GGTCGCACCC
GAGGTGCTGC TGCTCGACGA GCCGACCAAC CACCTCGACA TCGCGGCCAT CGAATGGCTG
GAAAACCTGC TGATCGAATC CGGTGTCACG CTGTTTTTCA TCACCCACGA CCGTTCTTTC
CTCGACCGCA TCTGTACCCG CATCGTCGAG CTCGATCGCG GCAAGCTGGT CAGCTTTCCC
GGCAGCTTCA AGGAATACCA GTTGCGCAAG GAGGCGCTGC TGCATGAAGA GGGGCTGGCA
AACGCGCGGG CCGACAAGTT GCTCAAGGAA GAAGAAATCT GGATTCGCAA GGGCGTCGAA
GCGCGGCGGA CGCGCGCCGT GTTCCGAGTC CAGCGGCTGG ATAAACTGCG GGCTGAACGT
CAGGCTAGAC GCGAACGGAT GGGCAAGGTC AATCTGCAGC TGGACTCCGG CGACAAGAGC
GGCAAGCTGG TGGCCGAACT GGAGCATGTC TTCAAATCCT ACGGCGAAAA GCCGATTGTT
CGCGATTTTT CAACCCGTAT TCAGCGCGGC GACAAGATCG GTCTGATCGG TCCCAATGGC
GCCGGCAAGA CGACGCTGCT CCGCTTGATC CTCGACGAAA TCAAGCCGGA TTCCGGCATC
GTGCGCCAGG GCACGAAAAT GGATATCGCC TATTTCGACC AGTTCCGCAC CCAGCTCGAT
CCCAATTCGA CGCTGTCCGA TGTCATTTCT CCGGGCTCGG ACTGGGTTGA TATCGGCGGT
GCTCGCAAGC ACGTCATTGG CTACCTCGAA GACTTCCTGT TTGCACCCGA GCGCGCCCGT
TCGCCGGTCA GTTCGCTGTC CGGCGGCGAG CGTAACCGCC TGCTGCTGGC CCGTCTGTTC
GCCAAACCGG CCAACGTGCT GGTCCTCGAC GAACCGACCA ACGACCTCGA CATCGAAACG
CTGGAGCTAC TCGAAGAACT GCTGCAAACC TACGAGGGCA CGCTGTTCCT GGTCAGCCAC
GACCGGACTT TCATCGACAA CGTCGTGACC CAGACCATCG CCGCTGAAGG CGACGGCGTC
TGGAAGGAAT ACGCCGGCGG TTACACCGAC TGGGCGACCT ACAAGGCCAG CGTGGCCAAG
GAAACGCCGA AGGCAAAGGC AGAAGCAAAG CCCGTCGCCA AGGCGCCGGA GCCCGTCAAG
TCCGCTGAAC CGGCCAAGCC GAAAGGCGAG AAGCTGTCCT GGAAAGAACA GCGAGAACTG
GACGAGCTAC CCGGAAAAAT CGCCGGGCTG GAAGCCGAGC AGGCCGAACT GGGCAAGCGT
CTCGAAGATG CTTCCCTTTA CCAGTCCGAT CCGGCTGCGG TGCAAAAGGC ATCCGAGCGC
CTGGCTGCCA TCGATGACGA GCTGATGGTG CTGCTCGAAC GTTGGGAAGG ACTCGAATCA
CGCGCCGGGA ACCCGGCGTA A
|
|---|
| Protein sequence | MPYFKLTDAC LAYGHVPLLD HADFLLDPGE RVALIGRNGT GKSSLLAAMA AGSGRGRLDD
GEVWVQPGIR VGYVSQEPPF DAESTVFEAV ISGMGENATL LAEYHEVSHK LSEVDADHEV
LLERMSALQH ELESRGAWAY EAQAERVIER FGLDPDARVG SLSGGQKKRL ALAQALAVAP
EVLLLDEPTN HLDIAAIEWL ENLLIESGVT LFFITHDRSF LDRICTRIVE LDRGKLVSFP
GSFKEYQLRK EALLHEEGLA NARADKLLKE EEIWIRKGVE ARRTRAVFRV QRLDKLRAER
QARRERMGKV NLQLDSGDKS GKLVAELEHV FKSYGEKPIV RDFSTRIQRG DKIGLIGPNG
AGKTTLLRLI LDEIKPDSGI VRQGTKMDIA YFDQFRTQLD PNSTLSDVIS PGSDWVDIGG
ARKHVIGYLE DFLFAPERAR SPVSSLSGGE RNRLLLARLF AKPANVLVLD EPTNDLDIET
LELLEELLQT YEGTLFLVSH DRTFIDNVVT QTIAAEGDGV WKEYAGGYTD WATYKASVAK
ETPKAKAEAK PVAKAPEPVK SAEPAKPKGE KLSWKEQREL DELPGKIAGL EAEQAELGKR
LEDASLYQSD PAAVQKASER LAAIDDELMV LLERWEGLES RAGNPA
|
|---|
| |