Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0806 |
Symbol | |
ID | 3569431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 875969 |
End bp | 877582 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637679262 |
Product | AAA ATPase, central region |
Protein accession | YP_284032 |
Protein GI | 71906445 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.343257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000100554 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGTTATC AAGTTCTTGC GCGCAAGTGG CGGCCGCGCA ATTTTTCTAC GCTGGTTGGG CAGGAGCATG TTGTCCGTGC CTTGACGCAT GCGCTTTCAG AGCAGCGTCT GCACCACGCC TATCTTTTTA CCGGTACGCG TGGGGTCGGG AAAACGACCT TGGCACGGAT TCTCGCTAAA TCTCTGAATT GTGAAACAGG CATCACTGCC ACACCATGTG GTACATGTTC GGCTTGCCAG GAAATTGACA GCGGTCGCTT TGTTGACTTG CTTGAGGTGG ACGCAGCGAC GAATACGCGT GTCGATGAGA TGCGCCAGTT GCTTGAGAAT GCCGTCTACG CGCCAACTCG GGGTCGCTTC AAAGTCTATG TGATCGACGA AGTTCACATG CTATCGAATT CGGCGTTCAA TGCCATGCTG AAGACGCTGG AAGAACCGCC TGAGCATGTG AAATTCATCC TCGCGACGAC CGATCCGCAA AAGATTCCTG TCACAGTTTT ATCCCGCTGC CTGCAATTCA ATCTGAAACA AATGCCGGTA CTGGCGATAA CGGGGCATCT TGGTCACATT CTCCAGGCAG AAGGGATTCC CTTCGATCAG CCGGCGCTTG CTCTGGTTGC TCGTTCTGCG GCCGGGAGTA TGCGGGATGC GCTATCTCTG CTGGATCAGG CGATAGCTCA TGGCGCAGGG AGAGTTGAAG AGGCCCAGGT TCGTAGCATG CTCGGTACGG TTGATCAGGA TTACCTTTTT ACCATCCTTG AGGCGCTGCA CGGCGCTGAG CCCTCGGCTC TGCTACAGGT CGCGGCAGAT CTCGGTATCC GCAGTCTCTC TTTCTCGGCT GCATTGCAGG AACTTGGTGC GCTGCTGACG CGTCTTCAGA TTGCCCAGTG CGTTCCGGGG GCGATCGATG ATGATGAGCC AGAGAGGGAT CGTTTGAAGG GGCTGGCAGC CGCGCTCTCG CCGGAGTTTG TTCAGCTAGC CTATCAAATC GTCAATGCGG GTCGTAATGA ATTGGCCGCA GCACCTGACG AGTATGCGGG TTTTGTCATG ACCCTGCTTC GGTTGTACAC CTTTCGTCCG AGTACTGTGG CTGATGTTGT TGGTGCGGCG GTACCTCGCG TCAACGCCGC TGGCGCAATG CCAAAAGCGG TACGTGCAAC TCCTGCCACG CAGAGCAGGG GGGACTCGAT TCCTGAGCCA GTGATCATTC CGAAATTGCC TCCCATTGCC AGCGGTGAGA TGGATTGGCA TCAGATTGTT GCATCGCTAT CGCTGTCTGG TTTGGCCAGA GAGTTGGCTC AGAACTGTGA GTTGAGACAA CTTAGTGAGA ATCAGTGTTT GCTTCGGTTG TCTCCGGCGC AAGGGCATCT TCAAATGAGG CCTAATCCAG ACCGGTTGCA ACAGGCCTTG AGTGATTTTT TTGGCCGCCC GTTACAGGTG CGCATAGAGC TGGCGCAGAA CGAAAATGTT ACGCCGGCAG AGACCGTTGG TCGCCAACGC CAAGAGCAGC AGGAGCGGGC TGCGACGGCC ATCGCTCAGG ATACGTTTGT CCGGGATGTA ATCGAATCTT TCGATGCGTC TCTCGTAGAG TCTTCCATTA AACCAATCGC CTAA
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Protein sequence | MSYQVLARKW RPRNFSTLVG QEHVVRALTH ALSEQRLHHA YLFTGTRGVG KTTLARILAK SLNCETGITA TPCGTCSACQ EIDSGRFVDL LEVDAATNTR VDEMRQLLEN AVYAPTRGRF KVYVIDEVHM LSNSAFNAML KTLEEPPEHV KFILATTDPQ KIPVTVLSRC LQFNLKQMPV LAITGHLGHI LQAEGIPFDQ PALALVARSA AGSMRDALSL LDQAIAHGAG RVEEAQVRSM LGTVDQDYLF TILEALHGAE PSALLQVAAD LGIRSLSFSA ALQELGALLT RLQIAQCVPG AIDDDEPERD RLKGLAAALS PEFVQLAYQI VNAGRNELAA APDEYAGFVM TLLRLYTFRP STVADVVGAA VPRVNAAGAM PKAVRATPAT QSRGDSIPEP VIIPKLPPIA SGEMDWHQIV ASLSLSGLAR ELAQNCELRQ LSENQCLLRL SPAQGHLQMR PNPDRLQQAL SDFFGRPLQV RIELAQNENV TPAETVGRQR QEQQERAATA IAQDTFVRDV IESFDASLVE SSIKPIA
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