Gene Daro_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0806 
Symbol 
ID3569431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp875969 
End bp877582 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content55% 
IMG OID637679262 
ProductAAA ATPase, central region 
Protein accessionYP_284032 
Protein GI71906445 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.343257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000100554 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGTTATC AAGTTCTTGC GCGCAAGTGG CGGCCGCGCA ATTTTTCTAC GCTGGTTGGG 
CAGGAGCATG TTGTCCGTGC CTTGACGCAT GCGCTTTCAG AGCAGCGTCT GCACCACGCC
TATCTTTTTA CCGGTACGCG TGGGGTCGGG AAAACGACCT TGGCACGGAT TCTCGCTAAA
TCTCTGAATT GTGAAACAGG CATCACTGCC ACACCATGTG GTACATGTTC GGCTTGCCAG
GAAATTGACA GCGGTCGCTT TGTTGACTTG CTTGAGGTGG ACGCAGCGAC GAATACGCGT
GTCGATGAGA TGCGCCAGTT GCTTGAGAAT GCCGTCTACG CGCCAACTCG GGGTCGCTTC
AAAGTCTATG TGATCGACGA AGTTCACATG CTATCGAATT CGGCGTTCAA TGCCATGCTG
AAGACGCTGG AAGAACCGCC TGAGCATGTG AAATTCATCC TCGCGACGAC CGATCCGCAA
AAGATTCCTG TCACAGTTTT ATCCCGCTGC CTGCAATTCA ATCTGAAACA AATGCCGGTA
CTGGCGATAA CGGGGCATCT TGGTCACATT CTCCAGGCAG AAGGGATTCC CTTCGATCAG
CCGGCGCTTG CTCTGGTTGC TCGTTCTGCG GCCGGGAGTA TGCGGGATGC GCTATCTCTG
CTGGATCAGG CGATAGCTCA TGGCGCAGGG AGAGTTGAAG AGGCCCAGGT TCGTAGCATG
CTCGGTACGG TTGATCAGGA TTACCTTTTT ACCATCCTTG AGGCGCTGCA CGGCGCTGAG
CCCTCGGCTC TGCTACAGGT CGCGGCAGAT CTCGGTATCC GCAGTCTCTC TTTCTCGGCT
GCATTGCAGG AACTTGGTGC GCTGCTGACG CGTCTTCAGA TTGCCCAGTG CGTTCCGGGG
GCGATCGATG ATGATGAGCC AGAGAGGGAT CGTTTGAAGG GGCTGGCAGC CGCGCTCTCG
CCGGAGTTTG TTCAGCTAGC CTATCAAATC GTCAATGCGG GTCGTAATGA ATTGGCCGCA
GCACCTGACG AGTATGCGGG TTTTGTCATG ACCCTGCTTC GGTTGTACAC CTTTCGTCCG
AGTACTGTGG CTGATGTTGT TGGTGCGGCG GTACCTCGCG TCAACGCCGC TGGCGCAATG
CCAAAAGCGG TACGTGCAAC TCCTGCCACG CAGAGCAGGG GGGACTCGAT TCCTGAGCCA
GTGATCATTC CGAAATTGCC TCCCATTGCC AGCGGTGAGA TGGATTGGCA TCAGATTGTT
GCATCGCTAT CGCTGTCTGG TTTGGCCAGA GAGTTGGCTC AGAACTGTGA GTTGAGACAA
CTTAGTGAGA ATCAGTGTTT GCTTCGGTTG TCTCCGGCGC AAGGGCATCT TCAAATGAGG
CCTAATCCAG ACCGGTTGCA ACAGGCCTTG AGTGATTTTT TTGGCCGCCC GTTACAGGTG
CGCATAGAGC TGGCGCAGAA CGAAAATGTT ACGCCGGCAG AGACCGTTGG TCGCCAACGC
CAAGAGCAGC AGGAGCGGGC TGCGACGGCC ATCGCTCAGG ATACGTTTGT CCGGGATGTA
ATCGAATCTT TCGATGCGTC TCTCGTAGAG TCTTCCATTA AACCAATCGC CTAA
 
Protein sequence
MSYQVLARKW RPRNFSTLVG QEHVVRALTH ALSEQRLHHA YLFTGTRGVG KTTLARILAK 
SLNCETGITA TPCGTCSACQ EIDSGRFVDL LEVDAATNTR VDEMRQLLEN AVYAPTRGRF
KVYVIDEVHM LSNSAFNAML KTLEEPPEHV KFILATTDPQ KIPVTVLSRC LQFNLKQMPV
LAITGHLGHI LQAEGIPFDQ PALALVARSA AGSMRDALSL LDQAIAHGAG RVEEAQVRSM
LGTVDQDYLF TILEALHGAE PSALLQVAAD LGIRSLSFSA ALQELGALLT RLQIAQCVPG
AIDDDEPERD RLKGLAAALS PEFVQLAYQI VNAGRNELAA APDEYAGFVM TLLRLYTFRP
STVADVVGAA VPRVNAAGAM PKAVRATPAT QSRGDSIPEP VIIPKLPPIA SGEMDWHQIV
ASLSLSGLAR ELAQNCELRQ LSENQCLLRL SPAQGHLQMR PNPDRLQQAL SDFFGRPLQV
RIELAQNENV TPAETVGRQR QEQQERAATA IAQDTFVRDV IESFDASLVE SSIKPIA