| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0773 |
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| Symbol | fliF |
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| ID | 3569272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 839925 |
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| End bp | 841679 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637679222 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_283999 |
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| Protein GI | 71906412 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.661967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAA CGACTGAGAC GACAGCAGGG ACTGCACCGG AACAAAACCC GGTGGACCGT
CTGCGCGAGG CATTCAACCG GCTCGGCAGT CAGCAGAAGA TCGTCTTCAT GGTCGCCATT
GCCGCCCTTA TCGCAATTAT TGTGGGGGCA ATCCTGTGGA GCCGACAGCC TGACTGGAAG
GTGCTTTTCT CGAATCTGAC GGAAAAAGAC GGGGGTTCCA TTGCGGCCAT TCTCGAGCAG
CAAAACATCC CTCACCGCTA CAGTAACAGC GGCGCCTTGC TTGTGCCATC CGACCGCGTC
CATGAAGTGC GCCTGAAGCT TGCTTCACAA GGCCTGCCAC GCGGTGGCAT GGTCGGTTTC
GAATTGATGG AAAACCAGAA ATTCGGGGTT AGCCAGTTTG CCGAACAGGT GAACTACCAA
CGCGGTCTAG AGGGCGAACT GGCCAGAACC ATCCAGTCGA TCGGCTCAGT GCAATCCGCC
CGCGTTCATC TGGCCATTCC CAAACCATCG GTATTCGTCC GCGAGGAGCA AAAACCGACG
GCATCCGTGA TGCTCAACCT CTATCCGGGC CGTACGCTCG ATGGTGGTCA GATTGCCGGC
ATTACGCATC TGGTGTCATC CAGCGTCCCC CAACTGCCGG CATCGAATGT GACGGTGCTC
GACCAGAGTG GCGCCTTGCT GTCACAACTG AAGAGCAAGC TGACCGAAGC GGGCCTGGAC
CCGACGCAGA TCAAATATGT TCACGACGTA GAAAACAGCA TTATCAAGCG CATTGATGAA
ATCCTCAGCC CGCTACTGGG CGCCGACAAT TTCAAGGTGC AGGTTGCTGC TGATATCGAC
TTTTCGCAAA CCGAGCAGAC CGCCGAAAGC TACCGTCCAA ACAACACGCC GGAAAGCACC
AGCATCCGCA GTCAGCAAAA CAACGAAACT GCCAACGTCA ATCAGGCCGC CGGCGGCGTA
CCGGGCGCGC TAACCAACCA GCCACCGGTG CCAGCCACAG CGCCACTGAC CCAGCCGGCG
ACCGGGACGA CTCCGGGACA GCCGGCAAAG CCAGGAGAGC CCCAGGGCAA AATCGACGCT
GCGGGGGTCA CCGCACCGCT CAACGCTGCA GGTCAACCGA TCAGCACCAG CAAAAATGCC
ACGATCAACT ATGAACTGGA CAAGACCATC CGCCATACCA GGCAGGGGAT GGGTAACATC
CGGCGCTTGT CGGCTGCCGT GGTCGTCAAT CATCGCAAGG ACGTCGACAA GACAGGCAAA
CCGCTGACCA AGGCAATTCC CGACGCGGAG ATGAAGCAAA TCAATGAACT GGTTCGCGAA
GCGATGGGGT TCACCAAGGA ACGAGGGGAT ACGCTGTCGG TGGCCAACGC CCCCTTCACC
GCCATCGACA AGAGCGAAAA CGAGTTGCCG ATCTGGAAAG ACCCGGAGAA CGTCTCTTAT
ATCAAGGATA TTCTCAAGTA TCTGCTGATC GCGGCCATCA TTGCCTTCCT CTACATCAAG
CTTATCCAGC CCTCGTTGAA AACGATGTTC CCGGCACGCC ATGAAGGCGA GAAACATGCT
GGAGATGGAA CCGGCCCAGG CGGCATATTC GGAGGAATAA CCGGCAGCGC GGAAGAGGCT
GGCGAAGATG GTTCAACCCA GGTGACTATC GACAACTACG CCATCAAGAT TCAGAAGGCT
CGCGAATTCG CCGAGAAAGA CTCAAAGGCG GTAGCCAACA TCATCAAGGA TTGGATGGGC
GTCAATGGCA ACTAG
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| Protein sequence | MAATTETTAG TAPEQNPVDR LREAFNRLGS QQKIVFMVAI AALIAIIVGA ILWSRQPDWK
VLFSNLTEKD GGSIAAILEQ QNIPHRYSNS GALLVPSDRV HEVRLKLASQ GLPRGGMVGF
ELMENQKFGV SQFAEQVNYQ RGLEGELART IQSIGSVQSA RVHLAIPKPS VFVREEQKPT
ASVMLNLYPG RTLDGGQIAG ITHLVSSSVP QLPASNVTVL DQSGALLSQL KSKLTEAGLD
PTQIKYVHDV ENSIIKRIDE ILSPLLGADN FKVQVAADID FSQTEQTAES YRPNNTPEST
SIRSQQNNET ANVNQAAGGV PGALTNQPPV PATAPLTQPA TGTTPGQPAK PGEPQGKIDA
AGVTAPLNAA GQPISTSKNA TINYELDKTI RHTRQGMGNI RRLSAAVVVN HRKDVDKTGK
PLTKAIPDAE MKQINELVRE AMGFTKERGD TLSVANAPFT AIDKSENELP IWKDPENVSY
IKDILKYLLI AAIIAFLYIK LIQPSLKTMF PARHEGEKHA GDGTGPGGIF GGITGSAEEA
GEDGSTQVTI DNYAIKIQKA REFAEKDSKA VANIIKDWMG VNGN
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