Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0761 |
Symbol | |
ID | 3569221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 830981 |
End bp | 831763 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637679210 |
Product | flagellar biosynthesis protein FliR |
Protein accession | YP_283987 |
Protein GI | 71906400 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 0.272612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAGCA TTGGGTCCGC CCAGATTGAT GCGTGGATTG TGGCCTTTGT CTTTCCTCTG GCCCGCATCT TGGGATTTAT TGCCGCCGCG CCGCTTTGGA GCACGGCAGG CATCCCGAGG CGAACCCGCC TGATACTTGC CATCTCGATC GCAGTAGCCA TCACGCCGAC CCTGCCGCCA ATGCCCGGCG TTCAACCCGG ATCGCTACCC GGCCTGTGGA TACTTGCGCA ACAGATGTTG ATCGGGATCG GCATGGGATT CGCCGCCAAG ATCGTGTTCA CAGCTTTCGA CATAGCGGGC GAATTTATCA GCTTCCAGAT GGGCTTGGGG TTTGCCACCT TTTACGACCC GCTCAATTCC TCGCAAACGC CGGTCATCAC CGAGTTCATT AGCCTGATCG CCCTGCTCCT GTTTCTTTCC ATGAACGGGC ACCTGCTTTA TCTGGCAACG CTGGCGCAGA GTTTTTCGGC TATCCCGGTT AGCGCCACAC CGCTTGGCGC ATCCTCCTGG CTGAATTTGG CAGAACTAGG GAGCAAAATC TTTTCGGCAG GGCTGTTGCT TTCGCTACCA ATCATTGTCG CTCTGATGAT TACCAATGTG GCGCTGGCCG TTCTGACGCG AGCTGCGCCG CAGTTGAATC TATTTGCTCT CGGTTTCCCG CTGACCTTGA TGGGAGGATT CGTTGCACTG GCCATCAGCC TGAACTACCT CGCCTCCCCA CTGCAAGGTA TTTTTGAATT CGGCATGAGC GCCATGCTTG GATTTGCCAG CACTCAAAAC TAG
|
Protein sequence | MISIGSAQID AWIVAFVFPL ARILGFIAAA PLWSTAGIPR RTRLILAISI AVAITPTLPP MPGVQPGSLP GLWILAQQML IGIGMGFAAK IVFTAFDIAG EFISFQMGLG FATFYDPLNS SQTPVITEFI SLIALLLFLS MNGHLLYLAT LAQSFSAIPV SATPLGASSW LNLAELGSKI FSAGLLLSLP IIVALMITNV ALAVLTRAAP QLNLFALGFP LTLMGGFVAL AISLNYLASP LQGIFEFGMS AMLGFASTQN
|
| |