| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0729 |
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| Symbol | |
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| ID | 3569120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 799360 |
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| End bp | 802197 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637679178 |
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| Product | PAS |
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| Protein accession | YP_283955 |
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| Protein GI | 71906368 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0635035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACCA ATTTGCCGGT AACCACCGTT GAACAGCATT TGCGGGATGA CACCCTGATC
GTATCGAAAA CCGATCTCAA GGGACGAATC ACGTATATCA ACCGCGATTT CCTCGATATC
AGTGGTTTTA CTGAACAGGA ACTGATTGGG GAACCCCATA ATCTAGTGCG TCATCCGGAG
ATGCCGCCAG AAGCCTTTGA GGATCTCTGG CGCGACCTGA AGGATGGGCG TCCCTGGACC
GGCATGGTCA AAAACCGGTG CAAGAACGGC GATTACTACT GGGTTCTCGC CACGGTGACA
CCTATCCGCG AGGGCGGTGA AATTCTTGGC TACATGTCGG TGCGCCGCAA GGCCTCGGCC
CAGCAGATTC AGGCCGCCGA AGAGGCCTAT CGGCTATTCC GTGAAAAACG TCAAGGCAGC
CTGCAGATTC GGCATGGAGC GGCCGTCAAG GGCGGACCGG GGCTGTTGTC GGCGCTTTCC
CTGAAAAGCC GCATGGCGGC TGGCTTTGCC GTCATCCTTC TGGTGGTTGC CGTGGTGGCA
GGGCTTGGTC TATGGGGCAT GGGGCGGAGC GACGATGCTG TTGCCAGGCT TTACAGCAGC
CGCCTTGAGC CAGTCCAGGA GTTGGCCGCA ATCGGCAAGC TGATGGCTGA TAATCGGTCG
CAAGTTCTTC TGGCTTTCCA GCACGACCCG GCCAGCCCCA ACGCCAAATC TCACGATCAC
AGCGTAGACA AGCATCTAGG TGTGATCGAT AAGAATATCG GCATCATCAC CGGGCATTGG
GAGCGTTACT CAAAAGCGAT TGCGTCTGAC GAGCACCGCC AGTTGGCAGA CGCCTATGTG
GCCGCCCGGA AGGTGTACGT CACCGAAGGC CTGCTGGCAG CGAAGGCTGC AATCGCGACT
GGTCGCTTCG ACGAAGCCAA CGACATTCTC TTAAAGAAGC TTAATCCGGC CTATGAAGAG
GCTTCAAAGC GTGCTGATGA TCTTTACCAA TTACAGATCA GTCGGGGCAA GACGCAACTG
GAGGAGACTG ACAAGGCTTA CCAGCAGTTC CGCATCATCG TGATTGCCAT TGTCCTGGCC
GCACTTGCTT TCGGCGCTCT TGTTGCTTGG AGCATCATGC GTTCTGTCAT GCGGCCGCTG
GATGACATCA TCGCGACCTT CCAGTCATTG GCTCGCGGCG ACTATACCCG TAACGTCGAT
ATCGCCCGGA ATGACGAACT AGGCAAGGTG ATGCAGGGGC TGCAATCGAT GCAGATTCAG
CAAGGGTTCA ACGTTGCCGA GGCGACACGC GTTGGTGAGG AAAACCTGCG GATCAAGATC
GGCCTCGACA ACGTGGCGAC CAACGTGATG ATTGCCGATG ACGGCCTTAA CATCATTTAC
ATGAATCATG CCGTGACCCA GATGTTCGCT GCGGTGGAGA GCGACATTCG CAAGGATTTG
CCGCAGTTCT CGGCCGCGTC GCTGATGGGT AGCAATATTG ACATCTTCCA CAAGAGCCCG
GCGCATCAGC GCGGCATGCT GGAACGTCTG ACAGGGACGC ATCGCGCCAC GATCAGGCTG
GGCGGGCGTG TCTTCGCGCT GACGGTGACG CCGGTCATCA ATACACGCGG TGGGCGCTTG
GGATTCGCCG TCGAATGGCT GGATCGGACC AACGAGGTTG CGGTCGAAGA GGAAGTGAAC
CAGATCGTCA GCGCTGCGGC GAATGGCGAT TTTACCAAGC GTGTCTCGGA TGCCGGCAAG
ACGGGCTTCT TCCTGACCTT GGCTGGCGAC CTCAATCGCC TGTTGGAAAC CAGCCAGCGA
GGCTTGGAAG ATGTGGTGGT GGTCTTGTCT GCGATGGCGG ATGGCGATCT GACGAAGACC
ATTGAGGCTG AATATGCTGG TACCTTCGGG CAGTTGAAGG ATGATGCCAA TACGACGGTT
GCTCGGTTGC AGGAAATCGT CGGGCAGATC AAAGAGTCAA CCGACGCGAT CAACACGGCG
GCGAAGGAGA TTGCGTCGGG CAACCAGGAC CTGTCGAGCC GGACGGAAGA GCAGGCAAGC
AGCCTGGAAG AAACGGCCTC GAGCATGGAG CAGCTGACCA GCACGGTGAA GCAGAACGCC
GACAATGCAC GGCAAGCCAA CGAGCTGGCT GGTAATGCCC AGCGGGTGGC GGTCAAGGGG
GGCGAAGTGG TGGGTCAGGT TGTGGACACG ATGAGCGCCA TTCACCAATC GAGCAGCAAG
ATTGCCGACA TTATTGGTGT CATTGACGGC ATTGCGTTCC AGACCAACAT TCTGGCACTC
AACGCCGCGG TAGAAGCCGC TCGGGCCGGC GAGCAAGGCC GTGGGTTTGC GGTGGTCGCC
ACCGAAGTGC GTAACCTGGC CCAACGCAGT GCTGCGGCCG CCAAGGAAAT CAAGGGGCTG
ATCTCCGACT CGGTGGAAAA GGTTGAAACC GGCAATAAGT TGGTCGATCA GGCTGGACGG
ACCATGGAAG AAGTGGTCTC GAGCATCAAG CGCGTCGCCA AGATCATGGG CGACATCTCC
GATGCCAGCC GTGAGCAAAG CTCGGGCATC GAGCAAGTCA GCCTGGCCGT CAGCCAGATG
GACGAAGTGA CGCAGCAGAA CGCGGCGCTA GTTGAAGAAG CGGCGGCGGC GGCTGAAAGC
CTGGAAGAGC AGGCTCACAA TCTCGCTCAG GCCGTCTCTG TCTTCAAGGT GGCCAATGCG
GGCGGCATGC CTCGTCTGGA GGCGCCGCGC ACTAGCCAGC GTGCCTCTGT GCCGCAAGCC
CCTCGTGGCG AGCGAATTGG CGCCAGGAAA GTGCAGGCAT TGCCAAGCAG TCTCGATGAT
GAGTGGGAAG AGTTCTGA
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| Protein sequence | MRTNLPVTTV EQHLRDDTLI VSKTDLKGRI TYINRDFLDI SGFTEQELIG EPHNLVRHPE
MPPEAFEDLW RDLKDGRPWT GMVKNRCKNG DYYWVLATVT PIREGGEILG YMSVRRKASA
QQIQAAEEAY RLFREKRQGS LQIRHGAAVK GGPGLLSALS LKSRMAAGFA VILLVVAVVA
GLGLWGMGRS DDAVARLYSS RLEPVQELAA IGKLMADNRS QVLLAFQHDP ASPNAKSHDH
SVDKHLGVID KNIGIITGHW ERYSKAIASD EHRQLADAYV AARKVYVTEG LLAAKAAIAT
GRFDEANDIL LKKLNPAYEE ASKRADDLYQ LQISRGKTQL EETDKAYQQF RIIVIAIVLA
ALAFGALVAW SIMRSVMRPL DDIIATFQSL ARGDYTRNVD IARNDELGKV MQGLQSMQIQ
QGFNVAEATR VGEENLRIKI GLDNVATNVM IADDGLNIIY MNHAVTQMFA AVESDIRKDL
PQFSAASLMG SNIDIFHKSP AHQRGMLERL TGTHRATIRL GGRVFALTVT PVINTRGGRL
GFAVEWLDRT NEVAVEEEVN QIVSAAANGD FTKRVSDAGK TGFFLTLAGD LNRLLETSQR
GLEDVVVVLS AMADGDLTKT IEAEYAGTFG QLKDDANTTV ARLQEIVGQI KESTDAINTA
AKEIASGNQD LSSRTEEQAS SLEETASSME QLTSTVKQNA DNARQANELA GNAQRVAVKG
GEVVGQVVDT MSAIHQSSSK IADIIGVIDG IAFQTNILAL NAAVEAARAG EQGRGFAVVA
TEVRNLAQRS AAAAKEIKGL ISDSVEKVET GNKLVDQAGR TMEEVVSSIK RVAKIMGDIS
DASREQSSGI EQVSLAVSQM DEVTQQNAAL VEEAAAAAES LEEQAHNLAQ AVSVFKVANA
GGMPRLEAPR TSQRASVPQA PRGERIGARK VQALPSSLDD EWEEF
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