| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0713 |
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| Symbol | |
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| ID | 3569104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 783587 |
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| End bp | 785014 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637679162 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_283939 |
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| Protein GI | 71906352 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000000000329894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.219559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGAA CGCAAACCAC ATATAACGAT AAGGTCGTAC GGCAATTCGC CGTCATGACT
GTCATCTGGG GCATCGTCGG CATGCTTGTC GGTGTCATCA TTGCAGCTCA ACTAGTCTGG
CCGGAATTGA ATTTTGGTCC GTGGTTGCAC TTCGGGCGCC TGCGTCCGTT GCATACCAAC
GCGGTTATTT TTGCGTTTGG TGGCTGTGCT TTGTTCGCAA CTTCTTACTG GTGTGTTCAG
CGCACCAGCC ATGCCCGTCT TTGGGGTGGT CCGCTGGTTC CCTTTACCTT CTGGGGTTGG
CAGCTTGTCA TTTTGGCTGC TGCAATCACG CTGCCTTTGG GTATGAGTCA GGGCAAGGAA
TACGCAGAGC TGGAGTGGCC GATCGACATC CTGATCACGC TGGTCTGGGT TTCTTATGCG
CTGGTCTTCT TCGGAACGAT CGCCAAGCGT ACGGTTTCTC ATATCTACGT AGCCAACTGG
TTCTTCGGTG CTTTCATCAT CGCTGTCGCG CTGCTGCATC TGGTTAATAG TGCTGCCATG
CCGATTACGC TGACCAAGTC CTATTCGGTC TATTCTGGCG TGCAGGATGC GATGATTCAG
TGGTGGTATG GTCACAACGC CGTGGGCTTC TTCCTGACCG CTGGCTTCCT GGGCATGATG
TACTACTTTG TGCCGAAGCA GGCTGGTCGT CCGGTTTACT CCTATCGCCT GTCTGTGGTC
CACTTCTGGG CCCTGATCTT TACCTACATG TGGGCTGGTC CTCACCACCT GCACTACACC
GCGCTGCCGG ATTGGACTCA GTCGGTCGGT ATGGTGTTCT CCCTGATTCT GCTGGCTCCG
TCCTGGGGTG GCATGATCAA CGGCATCATG ACCCTGTCGG GTGCCTGGCA TAAGTTGCGC
GACGACCCCA TCCTGAAGTT CCTGATCACT TCATTGTCTT TCTACGGTAT GTCTACCTTC
GAAGGTCCGA TGATGTCGAT CAAGACTGTC AATGCGCTGT CGCACTACAC GGACTGGACC
GTCGGTCACG TGCACTCCGG TGCTTTGGGC TGGGTGGCCA TGGTTTCCAT TGGTTCCATC
TATTACCTGC TGCCGAAGCT TTTCGGCAAG ACCGAGATGT ACAGCACCAA GCTGGTCACA
ACCCACTTCT GGATCGCTAC CATCGGTACC GTTCTGTATA TCGCCTCCAT GTGGATTGCC
GGTGTGATGC AGGGCTTGAT GTGGCGTGCG GTTAATGCCG ACGGTACGCT GGCTTACAGC
TTCGTCGAAT CCGTCAAGGG CTCCTACCCG TTCTGGGCGA TCCGTTGGCT GGGTGGTGTC
CTGTTCCTGT CTGGCATGCT GATCATGGCT TTCAACATGT TCAAGACCAT GGCTGGCGGC
AAGACTCAGG ATATGCCGGT GATCGCTCCG GCTGGTCATC ACGCCTGA
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| Protein sequence | MSGTQTTYND KVVRQFAVMT VIWGIVGMLV GVIIAAQLVW PELNFGPWLH FGRLRPLHTN
AVIFAFGGCA LFATSYWCVQ RTSHARLWGG PLVPFTFWGW QLVILAAAIT LPLGMSQGKE
YAELEWPIDI LITLVWVSYA LVFFGTIAKR TVSHIYVANW FFGAFIIAVA LLHLVNSAAM
PITLTKSYSV YSGVQDAMIQ WWYGHNAVGF FLTAGFLGMM YYFVPKQAGR PVYSYRLSVV
HFWALIFTYM WAGPHHLHYT ALPDWTQSVG MVFSLILLAP SWGGMINGIM TLSGAWHKLR
DDPILKFLIT SLSFYGMSTF EGPMMSIKTV NALSHYTDWT VGHVHSGALG WVAMVSIGSI
YYLLPKLFGK TEMYSTKLVT THFWIATIGT VLYIASMWIA GVMQGLMWRA VNADGTLAYS
FVESVKGSYP FWAIRWLGGV LFLSGMLIMA FNMFKTMAGG KTQDMPVIAP AGHHA
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