| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0642 |
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| Symbol | |
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| ID | 3568909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 705060 |
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| End bp | 706427 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637679085 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_283869 |
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| Protein GI | 71906282 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.821014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATA ACCTGACCAA CCGCCTTGCC CGCGTCATGA AGACGCTGAA GGGCGAAGCA
CGCCTGACTG AAACCAACAT CGGCGATGCC TTGCGCGAAG TGCGTATGGC GCTGCTTGAG
GCCGATGTGG CCTTGCCGGT GGTCAAGGAT TTTATTGCCG CCGTCAAGGA AAAGGCGGTC
GGTGAAGAAG TGATCGGTTC GTTGAGCCCT GGGCAGGCCT TGATTGGTGT TGTGCATGCC
GAACTGACCA AGATCATGGG TGATGCCCAT GAAGGCATCA ATTTCAATAC CCAGCCACCG
GCTATTGTGC TGATGGCGGG TTTGCAAGGC GCCGGCAAAA CAACAACAGT CGGTAAGCTG
GCCAAGTTCC TCAAGGAAAA TCACAAGAAG AAGGTGTTGG TCGTTTCCTG TGACGTTTAT
CGTCCAGCCG CTATCGAGCA GCTGAAATCG GTTGCCGGTC AGGCTGGGGT TGATTTCTTC
CCGTCGGCTG TTGGTGAGAA GCCGGAAGCG ATTGCCGCCG ACGCCATCGA TTGGGCCAAG
CGCCATTACC ACGACGTATT GCTGGTCGAC ACGGCGGGCC GACTGGCCAT CGACGAAGAA
ATGATGGCAG AAATCAAGCG CCTGCATGCG GCGATTGATC CAATTGAAAC GCTATTTGTG
GTCGACGCGA TGCTTGGCCA GGATGCGGTG AATACCGCCA AGGCCTTCAA CGAGGCGCTG
CCTCTGACCG GTGTCGTGCT GACTAAGCTG GATGGTGATG CACGCGGCGG TGCTGCATTG
TCGGTACGTC ACATCACCGG CAAGCCAATC AAATTCGCCG GGGTTGGCGA AAAGCTGAGT
GGCTTGGAGG CCTTTCATCC TGAGCGGATG GCGTCCCGTA TCCTGGGTAT GGGCGATGTG
CTGTCGCTAA TCGAGGAGGC GCGCAAGGGG CTGGATGAGG AAAAGGCGGT TGCCTTCGCC
AAGAAGTTGA AGTCAGGCAA GGGCTTTGAC CTCAATGATT TTAAGGAACA GATGGCCCAG
ATGCGCAATA TGGGCGGGCT GTCGGCATTG ATGGACAAGA TGCCGGCTCA GATCGCCCAG
GCGGCCGGGC AATTGCCCGC AGGGGCTGAG AATAAGATGA TTGGTCGGGT TGAAGGCATC
ATCAATTCGA TGACGCCAGC CGAGCGCGCC AAGCCGGAGC TGATCAAGGC CAGCCGCAAG
CGTCGTATTG CGATGGGGGC CGGGGTGCAG GTTCAGGAGG TTAACCGCCT GCTCAATCAG
TTCGAAACGA CCCAGAAGAT GATGAAGCAA TTTTCCAAGG GCGGTATTGG CAAGCTGATG
CGCGGCATGA AGGGCATGAT GCCCGGCATG GGCGGTATGG GACGCTGA
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| Protein sequence | MLDNLTNRLA RVMKTLKGEA RLTETNIGDA LREVRMALLE ADVALPVVKD FIAAVKEKAV
GEEVIGSLSP GQALIGVVHA ELTKIMGDAH EGINFNTQPP AIVLMAGLQG AGKTTTVGKL
AKFLKENHKK KVLVVSCDVY RPAAIEQLKS VAGQAGVDFF PSAVGEKPEA IAADAIDWAK
RHYHDVLLVD TAGRLAIDEE MMAEIKRLHA AIDPIETLFV VDAMLGQDAV NTAKAFNEAL
PLTGVVLTKL DGDARGGAAL SVRHITGKPI KFAGVGEKLS GLEAFHPERM ASRILGMGDV
LSLIEEARKG LDEEKAVAFA KKLKSGKGFD LNDFKEQMAQ MRNMGGLSAL MDKMPAQIAQ
AAGQLPAGAE NKMIGRVEGI INSMTPAERA KPELIKASRK RRIAMGAGVQ VQEVNRLLNQ
FETTQKMMKQ FSKGGIGKLM RGMKGMMPGM GGMGR
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