| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0628 |
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| Symbol | |
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| ID | 3568796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 692858 |
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| End bp | 693496 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637679071 |
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| Product | HAD family pyrimidine 5-nucleotidase |
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| Protein accession | YP_283855 |
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| Protein GI | 71906268 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 0.821924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC CTGTCTGGCT ATTCGACCTC GACAATACGC TGCACAACGC AACGCCGCAT
ATCTTCCCGC ATATCAACCG TTCGATGCGC GAATACATCG AGCGGCATCT GGGCGTAGAC
GAGCACGAGG CGACGCGTAT CCGGCAAGAT TACTGGGATC GCTACGGCGC CACCCTGCTC
GGACTGATGC GGCACCACGA CACCGACCCG AATCACTTTC TCCGGGAAAC CCATCAGTTC
ACCAATCTGA AGCAGATGGT CGTATTCGAG AAGCCACTGA TTCATATGCT GAATCGCCTC
CCTGGTCGGA AGATCATATT TTCGAATGCA CCGAGGCATT ATACGGAAGC GATTCTCGCC
ATCACTGGAC TAAAACCCTG CTTTGACGCC ATATATTCGG TAGAGAACCT CCATTTTCAG
CCGAAGCCAA TGCTGGCCGG ATTCCGTGCA TTACTAAAGG CGGAACACCT CAATCCGCGC
AACTGCATCA TGGTCGAAGA CAGCCTGGCC AATCTGGTCA GCGCCAAGAA ACTCGGCATG
AAAACCGTGT GGGTAAGCAC TGGCTTACGT CAATCGCCCT TTGTAGACGT CAAAATTAGC
TCTGCCCTAC AGTTATCAAA ACGCTGTAGC CGATTATAA
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| Protein sequence | MKKPVWLFDL DNTLHNATPH IFPHINRSMR EYIERHLGVD EHEATRIRQD YWDRYGATLL
GLMRHHDTDP NHFLRETHQF TNLKQMVVFE KPLIHMLNRL PGRKIIFSNA PRHYTEAILA
ITGLKPCFDA IYSVENLHFQ PKPMLAGFRA LLKAEHLNPR NCIMVEDSLA NLVSAKKLGM
KTVWVSTGLR QSPFVDVKIS SALQLSKRCS RL
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