Gene Daro_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0603 
SymbolglyA 
ID3568771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp673202 
End bp674452 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content62% 
IMG OID637679046 
Productserine hydroxymethyltransferase 
Protein accessionYP_283830 
Protein GI71906243 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCG CGAAAGACAC CCTGGCAAAA GTTGACCCTG AACTCTGGCA GGCCATTCAG 
GCCGAAGTAC AGCGTCAGGA AGACCACATC GAACTGATCG CGTCCGAAAA CTACGTGAGC
AAGGCTGTCA TGGAAGCCCA AGGCTCCCAG CTGACCAACA AGTACGCCGA AGGCTACCCG
GGTAAGCGCT ACTACGGTGG CTGCGAATAC GTTGACGTCG CCGAGCAGAT CGCCATCGAC
CGCCTGAAGA AGCTGTTCGG CGCCGAAGCC GCCAACGTCC AGCCGAATTC CGGTTCGCAG
GCCAACCAGG CCGTGCTGAT GGCCTTCGCC AAGCCAGGCG ACACCATCAT GGGCATGAGC
CTGGCCGAAG GCGGCCACCT GACCCACGGC ATGGCGCTGA ACATGTCCGG CAAGTGGTTC
AACGTCGTCT CCTACGGCCT GAATGAAAAG GAAGAGATCG ACTACGACAA GATGGAAGCG
CTGGCCCGCG AGCACAAGCC GAAGATCATC GTCGCCGGTG CCTCCGCCTA CGCCCTGCGC
ATCGACTGGG AACGCTTCGC CAAGATCGCC AAGGAAGTCG GCGCCATTTT CTGGGTCGAC
ATGGCCCACT ACGCCGGTCT GATCGCCGCC GGATTCTACC CGAACCCGGT GCCTTTCGCC
GATGTCGTGA CCTCGACCAC GCACAAGACC CTGCGCGGCC CACGCGGTGG TGTCATCCTG
ATGAAGGCCG AGCACGAAAA GGCCCTCAAT TCCGCCATCT TCCCGGGCCT GCAAGGCGGT
CCGCTGGAGC ATGTGATCGC CGCCAAGGCC GTCGCCTTCA AGGAAGCCGC GACGCCCGAG
TTCAAGAACT ACCAGGAACA GGTCATCAAC AACGCCCGCG TCATGGCGCG CGTGCTCGGT
GAAGAGCGCG GTCTGCGCAT CGTTTCTGGC CGTACCGAAA GCCACGTCTT CCTGCTCGAC
CTGCGCGCCA AGAACATCAC CGGCAAGGAT GCCGAAGCCG CTCTGGGCCG CGCCCACATC
ACGGTCAACA AAAACGGCAT CCCGAACGAC CCGCAGAAGC CGTTTGTTAC CTCCGGCATC
CGTATCGGTT CGCCGGCCAT GACGACGCGC GGTTTCACCG AAATCGAAGC CGAGCAGATC
GCTCATCTGG TTGCTGATGT GCTGGAAGCA CCGAGCGACG AAGCCGTGGC CGCAACTGTT
CGCGAGAAAG TTTCGGCCCT GTGCAAGAAG TTCCCGGTCT ACGGCGCCTA A
 
Protein sequence
MFSAKDTLAK VDPELWQAIQ AEVQRQEDHI ELIASENYVS KAVMEAQGSQ LTNKYAEGYP 
GKRYYGGCEY VDVAEQIAID RLKKLFGAEA ANVQPNSGSQ ANQAVLMAFA KPGDTIMGMS
LAEGGHLTHG MALNMSGKWF NVVSYGLNEK EEIDYDKMEA LAREHKPKII VAGASAYALR
IDWERFAKIA KEVGAIFWVD MAHYAGLIAA GFYPNPVPFA DVVTSTTHKT LRGPRGGVIL
MKAEHEKALN SAIFPGLQGG PLEHVIAAKA VAFKEAATPE FKNYQEQVIN NARVMARVLG
EERGLRIVSG RTESHVFLLD LRAKNITGKD AEAALGRAHI TVNKNGIPND PQKPFVTSGI
RIGSPAMTTR GFTEIEAEQI AHLVADVLEA PSDEAVAATV REKVSALCKK FPVYGA