Gene Daro_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0563 
Symbol 
ID3568888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp626526 
End bp627191 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content57% 
IMG OID637679006 
ProductAlkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_283790 
Protein GI71906203 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.958188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTT GGTTAAATTG CATGTTTCCC CCCAACCTCA AAACCGATCA CGATAAGGAG 
TTCCCCATGG CCGTTCTCGT TGGCAAGCAA GCCCCGGATT TCACCGCCAC CGCCGTTTAT
GGCAACAACG AAATCAAGGA ACTGAAGCTG TCCTCCTTCA AGGGCAAGCC TGTCGTTCTC
TTTTTCTACC CGCTCGATTT CACCTTCGTC TGCCCGTCCG AACTGATCGC TTTCGATCAC
CGCCTGGAAG AATTCAAGCA GCGCGGCGTT GAAGTGATCG GCGTCTCCAT CGATTCCCAG
TTCACCCATC TGGCCTGGAA GAACACCGCC GTCAAGGAAG GCGGCATTGG CCCGGTTGGC
TATCCGCTGG TTGCCGACGT CAAGCATGAA ATCTGCCGCG CCTACGACGT CGAACTCGAA
GCTGCCGGTG TCGCCCTGCG CGGTTCCTTC CTGATTGATA AAAATGGCAC CGTCATGCAC
CAGGTCGTCA ACATGCTGCC GCTCGGCCGC AACATCGACG AAATGCTGCG CATGGTCGAT
GCCCTGCAGT TCTTCGAAGA AAACGGCGAA GTTTGTCCGG CCGGCTGGAA CAAGGGCAAG
CCGGGCATGG TCGCCTCCAC GGAAGGTGTC GCTGCTTACC TGGCCAAGAA CGCCAAGAAG
CTGTAA
 
Protein sequence
MAAWLNCMFP PNLKTDHDKE FPMAVLVGKQ APDFTATAVY GNNEIKELKL SSFKGKPVVL 
FFYPLDFTFV CPSELIAFDH RLEEFKQRGV EVIGVSIDSQ FTHLAWKNTA VKEGGIGPVG
YPLVADVKHE ICRAYDVELE AAGVALRGSF LIDKNGTVMH QVVNMLPLGR NIDEMLRMVD
ALQFFEENGE VCPAGWNKGK PGMVASTEGV AAYLAKNAKK L