Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0552 |
Symbol | |
ID | 3568877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 613940 |
End bp | 614851 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637678995 |
Product | LysR family transcriptional regulator |
Protein accession | YP_283779 |
Protein GI | 71906192 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.268778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTT CATTCGACTT GTTACTCATC CTCGACGCCA TCGACCGTCA CGGTAGTTTC ACCGCCGCCG CCACGGCGCT GCATCGCGTC CCGTCGGCGC TATCGCACGC CATCGCCAAA CTGGAAGGCG AGCTTGGCGC CACGCTGTTT CACCGCGAAG GGCGGCGTGC CACGCTGAAC GAGGCCGGAC ATACGCTACT CGAAGATGGC CGCCACCTGC TGCGCAGCGC CAGCGAGCTG GAGCGCCGCG TCCAGCGCAT CGCCCAGGGC TGGGAGGCCG AATTGCGCAT TGCCATCGAC ACCATCATTC CGGTCGAGCG CATCTACCCC ATGCTGGAGC GCTTTTATGC CGCCGGTCAC AGCACCCAGC TTCGCCTCAG CTACGAAGTG CTGGGCGGCA CCTGGGATGC CCTGGCCACC GACCGGGCCG ACCTGGTGAT CGGCGCCAGC GGCGACATGC CGGCCCGCAG CGGCATCGCC ACCCGCCTGC TGTGCCGGCA CAGCCAGTTC GTCTTCGCGA TTGCGCCAAG CCATCCGCTG GCCGCCTGGA CGGAGCCGAT TCCCAACAGC GAACTGCTGC GCCATCGCAC CATCGCCATC GCCGACACCT CGCAGGAACT GGCCGCACGC ACGATCGGCC TGATCGAAGG CCAGGACATC CTGCGCGTTC CCGACATCCG TGCCAAGGCA GCCGCCCAGG TGGCCGGCCT CGGTATTGGT CACCTGCCGC GCTGGCTGGC CGATCCGGAA ATCGCGGCCG GACGCCTGGT CGAGAAAGCG CTGGCCGACC CACGCCATCC GATGCCGCTG CACCTGGCCT GGCGCACTCG GCAAAGCGGC AAGGCGCTGA ACTGGTTTCT CGATAGCCTG GCGGAAAAAG CAAATATCGA CCGGCTGACC CAGGGGCTAT AA
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Protein sequence | MKISFDLLLI LDAIDRHGSF TAAATALHRV PSALSHAIAK LEGELGATLF HREGRRATLN EAGHTLLEDG RHLLRSASEL ERRVQRIAQG WEAELRIAID TIIPVERIYP MLERFYAAGH STQLRLSYEV LGGTWDALAT DRADLVIGAS GDMPARSGIA TRLLCRHSQF VFAIAPSHPL AAWTEPIPNS ELLRHRTIAI ADTSQELAAR TIGLIEGQDI LRVPDIRAKA AAQVAGLGIG HLPRWLADPE IAAGRLVEKA LADPRHPMPL HLAWRTRQSG KALNWFLDSL AEKANIDRLT QGL
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