Gene Daro_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0552 
Symbol 
ID3568877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp613940 
End bp614851 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content67% 
IMG OID637678995 
ProductLysR family transcriptional regulator 
Protein accessionYP_283779 
Protein GI71906192 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.268778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTT CATTCGACTT GTTACTCATC CTCGACGCCA TCGACCGTCA CGGTAGTTTC 
ACCGCCGCCG CCACGGCGCT GCATCGCGTC CCGTCGGCGC TATCGCACGC CATCGCCAAA
CTGGAAGGCG AGCTTGGCGC CACGCTGTTT CACCGCGAAG GGCGGCGTGC CACGCTGAAC
GAGGCCGGAC ATACGCTACT CGAAGATGGC CGCCACCTGC TGCGCAGCGC CAGCGAGCTG
GAGCGCCGCG TCCAGCGCAT CGCCCAGGGC TGGGAGGCCG AATTGCGCAT TGCCATCGAC
ACCATCATTC CGGTCGAGCG CATCTACCCC ATGCTGGAGC GCTTTTATGC CGCCGGTCAC
AGCACCCAGC TTCGCCTCAG CTACGAAGTG CTGGGCGGCA CCTGGGATGC CCTGGCCACC
GACCGGGCCG ACCTGGTGAT CGGCGCCAGC GGCGACATGC CGGCCCGCAG CGGCATCGCC
ACCCGCCTGC TGTGCCGGCA CAGCCAGTTC GTCTTCGCGA TTGCGCCAAG CCATCCGCTG
GCCGCCTGGA CGGAGCCGAT TCCCAACAGC GAACTGCTGC GCCATCGCAC CATCGCCATC
GCCGACACCT CGCAGGAACT GGCCGCACGC ACGATCGGCC TGATCGAAGG CCAGGACATC
CTGCGCGTTC CCGACATCCG TGCCAAGGCA GCCGCCCAGG TGGCCGGCCT CGGTATTGGT
CACCTGCCGC GCTGGCTGGC CGATCCGGAA ATCGCGGCCG GACGCCTGGT CGAGAAAGCG
CTGGCCGACC CACGCCATCC GATGCCGCTG CACCTGGCCT GGCGCACTCG GCAAAGCGGC
AAGGCGCTGA ACTGGTTTCT CGATAGCCTG GCGGAAAAAG CAAATATCGA CCGGCTGACC
CAGGGGCTAT AA
 
Protein sequence
MKISFDLLLI LDAIDRHGSF TAAATALHRV PSALSHAIAK LEGELGATLF HREGRRATLN 
EAGHTLLEDG RHLLRSASEL ERRVQRIAQG WEAELRIAID TIIPVERIYP MLERFYAAGH
STQLRLSYEV LGGTWDALAT DRADLVIGAS GDMPARSGIA TRLLCRHSQF VFAIAPSHPL
AAWTEPIPNS ELLRHRTIAI ADTSQELAAR TIGLIEGQDI LRVPDIRAKA AAQVAGLGIG
HLPRWLADPE IAAGRLVEKA LADPRHPMPL HLAWRTRQSG KALNWFLDSL AEKANIDRLT
QGL