| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0522 |
|---|
| Symbol | |
|---|
| ID | 3567351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 582389 |
|---|
| End bp | 583183 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637678964 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_283749 |
|---|
| Protein GI | 71906162 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 73 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGC AACCAATCAC TGAAGACGAA CTGCAAGCCT ATGTCGATGA TGCGCTGACG
CCGGAGTGGC AGGCGGTGCT CGAGGCACAC CTAGCACTGA ACCCGGGGGA TGCCGAACGG
GTCGTCGCCT ATCGGGCCCA GAAGCAGGCG CTTAAGGCGC TGTTCCAGCC GATGCTCGAC
GAACCCTTGC CGGAACGCCT GCAGATCCTG ACGGTTCAAC CGCTCAGAGC GCCGACCGGT
GGTGGCTGGA CCGGCGGCCT GTGGCAGCGC CTGGCAGCCG GACTGCTGGT TGCCGCACTG
GGTGGTGCCG GCGGCTGGCT GGCGCACGGC CAGTATTTGC AAGGCGACCG CATGGCCCGC
ATGGTGCCGC TGTCGCATCA GGCGGCCGTG GCGCATGTGG TGTACAGCCC GGACGTGCGC
CGCCCGGTTG AAATTGCCGC GGATCAGGAA GAGGCGCTGG TCAAATGGCT GAGCAAGCGG
CTCGGCACGC CGGTCAGGCC GCCCAAGCTC GGTGCCCTCG GCTACGAACT GGTCGGCGGT
CGCTTGCTGC CCGGCAATAG CGGCCCGGTC GCCCAGTTCA TGTACCACGA TGCCAGTGGC
CAGCGCATGA CACTGTACGT GACCACCGAA AGCATCGAGA AGCGCGATAC CGGCTTCCGC
TTCGCTCGCG AAGGCCCGGT CAATGTCTTC TACTGGGTCG ATGGCAAGTT CGGCTATGCC
CTGTCGGCCG GCATCGACAA GGGCGAACTG GCCAAGGTTG CCACCGCGGT CTACGACCAG
CTCGATCAAA AATAA
|
|---|
| Protein sequence | MTSQPITEDE LQAYVDDALT PEWQAVLEAH LALNPGDAER VVAYRAQKQA LKALFQPMLD
EPLPERLQIL TVQPLRAPTG GGWTGGLWQR LAAGLLVAAL GGAGGWLAHG QYLQGDRMAR
MVPLSHQAAV AHVVYSPDVR RPVEIAADQE EALVKWLSKR LGTPVRPPKL GALGYELVGG
RLLPGNSGPV AQFMYHDASG QRMTLYVTTE SIEKRDTGFR FAREGPVNVF YWVDGKFGYA
LSAGIDKGEL AKVATAVYDQ LDQK
|
|---|
| |