Gene Daro_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0481 
SymbolaspA 
ID3570205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp542936 
End bp544360 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content65% 
IMG OID637678923 
Productaspartate ammonia-lyase 
Protein accessionYP_283708 
Protein GI71906121 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1027] Aspartate ammonia-lyase 
TIGRFAM ID[TIGR00839] aspartate ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CTCCCTTCCG CCTCGAGCAT GACCTGCTTG GTGACCGCGA GGTTCCGACC 
GCCGCCTACT ACGGGGTACA CACCCTGCGA GCCCTTGAGA ATTTCCCGAT CACCGGCATC
TCGATCGCCG TCTATCCCGA CCTGATCCGC GCCCTGGCCC AGATCAAGAA GGCCGCCGCC
CAGGCCAACC AGCAACTCGG CCTGCTCGAT GCCCGGCGCG CCGGCGCCAT CGCCGAAGCC
TGCGGCGAGA TCATCGACGG CCAGTGGCAC AACCAGTTCG TCGTCGATGT CATTCAGGGC
GGCGCCGGCA CCTCGACCAA CATGAATGCC AACGAGGTGA TCGCCAACCG TGCGCTGGAA
CTGCTCGGCA AGACGCGCGG CGACTACAAG ACGCTGCACC CGAACGAACA CGTCAACATG
AGCCAGTCGA CCAACGACGT CTATCCGACG GCGCTGAAGC TGGCCACCTA TGTCGGCATC
TTCCGCCTGG TCGAGGCCAT GGCTTATCTG CGCAAAGCTT TCGAGCGCAA GGCCGACGAG
TTCGCCGACG TGCTGAAGAT GGGCCGTACC CAGTTGCAGG ACGCCGTGCC GATGACCCTC
GGCCAGGAGT TCTCGACCTA CGCCGTGATG TTGGGCGAGG ACGAAGAACG CCTGAAGGAA
GCCGCACTGC TCATCCGCGA AATGAATCTC GGTGCCACCG CCATTGGCAC CGGCATCAAC
GCCCACCCGG ACTACGCCCC GCTGGTCTGC CGCAAGCTGG CCGAAATCAG CGGCATCCCG
GTCGTCACCG CGCCCAACCT GATCGAGGCG ACGCAGGATT GCGGCAGCTT CGTGCAACTG
TCCGGCGTCC TGAAGCGCGT CGCCGTCAAG CTATCCAAGG TCTGCAACGA CCTGCGCCTG
CTCTCTTCCG GCCCGCGTGC CGGCTTCAAC GAGATCAATC TGCCGCCGCG CCAGGCCGGT
TCGTCGATCA TGCCGGGCAA GGTCAATCCG GTGATCCCGG AAGTGGTCAA CCAGATCGCC
TTCGAAGTGA TCGGCAACGA CACCACCGTC ACTTTCGCCG CCGAAGCCGG CCAGCTGCAG
CTCAATGCCT TCGAGCCGAT CATCGCCCAC AGCCTGTTCA AGAGCGCCCT GCACCTGACC
AACGGCTGCC GCGTGCTGGC CGACCATTGC GTCAATGGCA TCACCGCCAA CCGCGATCAG
CTGCGCGAAT CGGTCGAGCG CTCGATCGGC ATCGTCACCG CCCTCAACCC GTACATTGGT
TACGCCAACG CCACCGAAGT CGCTGCCGAA GCCTTCCGTA GCGGGCGCGG CGTGGCCGAG
GTGGTCATCG AACGCGGTCT GATGAGCCCG GAACAGCTGG CCGAAGTGCT GCGTCCCGAG
GTGCTGACCC GCCCACAAGT CATCCCCCTG CCTGTCGCCG CCTGA
 
Protein sequence
MTTTPFRLEH DLLGDREVPT AAYYGVHTLR ALENFPITGI SIAVYPDLIR ALAQIKKAAA 
QANQQLGLLD ARRAGAIAEA CGEIIDGQWH NQFVVDVIQG GAGTSTNMNA NEVIANRALE
LLGKTRGDYK TLHPNEHVNM SQSTNDVYPT ALKLATYVGI FRLVEAMAYL RKAFERKADE
FADVLKMGRT QLQDAVPMTL GQEFSTYAVM LGEDEERLKE AALLIREMNL GATAIGTGIN
AHPDYAPLVC RKLAEISGIP VVTAPNLIEA TQDCGSFVQL SGVLKRVAVK LSKVCNDLRL
LSSGPRAGFN EINLPPRQAG SSIMPGKVNP VIPEVVNQIA FEVIGNDTTV TFAAEAGQLQ
LNAFEPIIAH SLFKSALHLT NGCRVLADHC VNGITANRDQ LRESVERSIG IVTALNPYIG
YANATEVAAE AFRSGRGVAE VVIERGLMSP EQLAEVLRPE VLTRPQVIPL PVAA